gnu: Add r-microbiome.
* gnu/packages/bioconductor.scm (r-microbiome): New variable.master
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@ -9736,6 +9736,43 @@ to identify differentially methylated regions in epigenetic epidemiology
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studies.")
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(license license:artistic2.0)))
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(define-public r-microbiome
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(package
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(name "r-microbiome")
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(version "1.18.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "microbiome" version))
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(sha256
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(base32
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"1z9arkjp5xszlg07mzb4p163i74jfbd9p4gbwv5syivnpl040k12"))))
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(properties `((upstream-name . "microbiome")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-biostrings
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r-compositions
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r-dplyr
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r-ggplot2
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r-phyloseq
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r-reshape2
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r-rtsne
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r-scales
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r-tibble
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r-tidyr
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r-vegan))
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(native-inputs (list r-knitr))
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(home-page "https://microbiome.github.io/microbiome/")
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(synopsis "Tools for microbiome analysis")
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(description
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"This package facilitates phyloseq exploration and analysis of taxonomic
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profiling data. This package provides tools for the manipulation, statistical
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analysis, and visualization of taxonomic profiling data. In addition to
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targeted case-control studies, microbiome facilitates scalable exploration of
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population cohorts. This package supports the independent phyloseq data
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format and expands the available toolkit in order to facilitate the
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standardization of the analyses and the development of best practices.")
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(license license:bsd-2)))
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(define-public r-milor
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(package
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(name "r-milor")
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