gnu: Add r-cummerbund.
* gnu/packages/bioconductor.scm (r-cummerbund): New variable.master
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@ -1096,6 +1096,36 @@ experiment types where it is important to have a framework in order to inspect
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how the coverage distributed across the genome.")
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how the coverage distributed across the genome.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-cummerbund
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(package
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(name "r-cummerbund")
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(version "2.28.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "cummeRbund" version))
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(sha256
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(base32
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"1fjc3bcclm4gsvw4nq6cv3a1kbrldvrxbkyfb9306708si1n4dwk"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-fastcluster", r-fastcluster)
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("r-ggplot2" ,r-ggplot2)
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("r-gviz" ,r-gviz)
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("r-plyr" ,r-plyr)
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("r-reshape2" ,r-reshape2)
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("r-rsqlite" ,r-rsqlite)
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("r-rtracklayer" ,r-rtracklayer)
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("r-s4vectors" ,r-s4vectors)))
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(home-page "https://bioconductor.org/packages/cummeRbund/")
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(synopsis "Analyze Cufflinks high-throughput sequencing data")
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(description "This package allows for persistent storage, access,
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exploration, and manipulation of Cufflinks high-throughput sequencing
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data. In addition, provides numerous plotting functions for commonly
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used visualizations.")
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(license license:artistic2.0)))
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(define-public r-curatedtcgadata
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(define-public r-curatedtcgadata
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(package
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(package
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(name "r-curatedtcgadata")
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(name "r-curatedtcgadata")
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