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gnu: Add r-bbcanalyzer.

* gnu/packages/bioconductor.scm (r-bbcanalyzer): New variable.

Change-Id: Icd3c77c9522d73638ddb0934ad332ddb7b947a8e
Mădălin Ionel Patrașcu 2023-11-06 12:06:48 +01:00 committed by Ricardo Wurmus
parent 17978740e5
commit 08c745dcfc
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1 changed files with 30 additions and 0 deletions

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@ -22867,6 +22867,36 @@ output is either point estimates from posterior (2D array) or samples from
posterior (3D array).")
(license license:gpl2+)))
(define-public r-bbcanalyzer
(package
(name "r-bbcanalyzer")
(version "1.32.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BBCAnalyzer" version))
(sha256
(base32 "108jcgsf5hyj348y17hcw8m3zcfjgzpx8nz4n5jgxp2lgxjyizy1"))))
(properties `((upstream-name . "BBCAnalyzer")))
(build-system r-build-system)
(propagated-inputs
(list r-biostrings
r-genomicranges
r-iranges
r-rsamtools
r-summarizedexperiment
r-variantannotation))
(home-page "https://bioconductor.org/packages/BBCAnalyzer")
(synopsis "Visualizing base counts")
(description
"BBCAnalyzer is a package for visualizing the relative or absolute number
of bases, deletions and insertions at defined positions in sequence alignment
data available as bam files in comparison to the reference bases. Markers for
the relative base frequencies, the mean quality of the detected bases, known
mutations or polymorphisms and variants called in the data may additionally be
included in the plots.")
(license license:lgpl3)))
(define-public r-biocthis
(package
(name "r-biocthis")