gnu: Add r-coverageview.
* gnu/packages/bioconductor.scm (r-coverageview): New variable.master
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@ -1069,6 +1069,33 @@ examples' of Affymetrix data, unlike the artificial examples included in the
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package @code{affy}.")
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package @code{affy}.")
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(license license:gpl2+)))
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(license license:gpl2+)))
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(define-public r-coverageview
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(package
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(name "r-coverageview")
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(version "1.24.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "CoverageView" version))
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(sha256
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(base32
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"0s47svs7xnr9jkylq0dxidqrigihdddiprcl0951vjr4w7kmb5nf"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-s4vectors" ,r-s4vectors)
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("r-iranges" ,r-iranges)
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("r-genomicranges" ,r-genomicranges)
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("r-genomicalignments" ,r-genomicalignments)
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("r-rtracklayer" ,r-rtracklayer)
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("r-rsamtools" ,r-rsamtools)))
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(home-page "https://bioconductor.org/packages/CoverageView/")
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(synopsis "Coverage visualization package for R")
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(description "This package provides a framework for the visualization of
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genome coverage profiles. It can be used for ChIP-seq experiments, but it can
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be also used for genome-wide nucleosome positioning experiments or other
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experiment types where it is important to have a framework in order to inspect
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how the coverage distributed across the genome.")
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(license license:artistic2.0)))
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(define-public r-curatedtcgadata
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(define-public r-curatedtcgadata
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(package
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(package
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(name "r-curatedtcgadata")
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(name "r-curatedtcgadata")
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