gnu: Add r-chromstar.
* gnu/packages/bioconductor.scm (r-chromstar): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
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		|  | @ -10643,6 +10643,44 @@ large-scale and fully automated analysis.") | |||
| the earlier snpMatrix package, allowing for uncertainty in genotypes.") | ||||
|     (license license:gpl3))) | ||||
| 
 | ||||
| (define-public r-chromstar | ||||
|   (package | ||||
|     (name "r-chromstar") | ||||
|     (version "1.16.0") | ||||
|     (source | ||||
|      (origin | ||||
|        (method url-fetch) | ||||
|        (uri (bioconductor-uri "chromstaR" version)) | ||||
|        (sha256 | ||||
|         (base32 | ||||
|          "0vgpb7g2cncdn82hia2yzzachyns2zbd7906662g990qjnp2xlm1")))) | ||||
|     (properties `((upstream-name . "chromstaR"))) | ||||
|     (build-system r-build-system) | ||||
|     (propagated-inputs | ||||
|      `(("r-bamsignals" ,r-bamsignals) | ||||
|        ("r-biocgenerics" ,r-biocgenerics) | ||||
|        ("r-chromstardata" ,r-chromstardata) | ||||
|        ("r-doparallel" ,r-doparallel) | ||||
|        ("r-foreach" ,r-foreach) | ||||
|        ("r-genomeinfodb" ,r-genomeinfodb) | ||||
|        ("r-genomicalignments" ,r-genomicalignments) | ||||
|        ("r-genomicranges" ,r-genomicranges) | ||||
|        ("r-ggplot2" ,r-ggplot2) | ||||
|        ("r-iranges" ,r-iranges) | ||||
|        ("r-mvtnorm" ,r-mvtnorm) | ||||
|        ("r-reshape2" ,r-reshape2) | ||||
|        ("r-rsamtools" ,r-rsamtools) | ||||
|        ("r-s4vectors" ,r-s4vectors))) | ||||
|     (native-inputs `(("r-knitr" ,r-knitr))) | ||||
|     (home-page "https://github.com/ataudt/chromstaR") | ||||
|     (synopsis "Chromatin state analysis for ChIP-Seq data") | ||||
|     (description | ||||
|      "This package implements functions for combinatorial and differential | ||||
| analysis of ChIP-seq data.  It includes uni- and multivariate peak-calling, | ||||
| export to genome browser viewable files, and functi ons for enrichment | ||||
| analyses.") | ||||
|     (license license:artistic2.0))) | ||||
| 
 | ||||
| (define-public r-sushi | ||||
|   (package | ||||
|     (name "r-sushi") | ||||
|  |  | |||
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