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gnu: Add scallop.

* gnu/packages/bioinformatics.scm (scallop): New variable.
master
Ricardo Wurmus 2023-01-04 17:14:01 +01:00
parent ddebb5c563
commit 10e1025c63
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@ -10869,6 +10869,28 @@ traditional read alignments) and massively-parallel stochastic collapsed
variational inference.") variational inference.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public scallop
(package
(name "scallop")
(version "0.10.5")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/Kingsford-Group/scallop"
"/releases/download/v" version
"/scallop-" version ".tar.gz"))
(sha256
(base32
"0ylkhr5hsmw7bsdszrjz9yqknsijh2fl5n6rjqmdmcdky5hkr7mh"))))
(build-system gnu-build-system)
(inputs
(list boost htslib))
(home-page "https://github.com/Kingsford-Group/scallop")
(synopsis "Reference-based transcriptome assembler for RNA-seq")
(description "Scallop is a reference-based transcript assembler. Scallop
features its high accuracy in assembling multi-exon transcripts as well as
lowly expressed transcripts.")
(license license:bsd-3)))
(define-public python-fanc (define-public python-fanc
(package (package
(name "python-fanc") (name "python-fanc")