gnu: r-annotationdbi: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-annotationdbi): Move from here... * gnu/packages/bioconductor.scm (r-annotationdbi): ...to here.master
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@ -1538,6 +1538,35 @@ structure.")
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microarrays.")
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microarrays.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-annotationdbi
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(package
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(name "r-annotationdbi")
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(version "1.52.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "AnnotationDbi" version))
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(sha256
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(base32
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"0zqxgh3nx6y8ry12s2vss2f4axz5vpqxha1y4ifhhcx4zhpzsglr"))))
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(properties
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`((upstream-name . "AnnotationDbi")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-dbi" ,r-dbi)
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("r-iranges" ,r-iranges)
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("r-rsqlite" ,r-rsqlite)
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("r-s4vectors" ,r-s4vectors)))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/AnnotationDbi")
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(synopsis "Annotation database interface")
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(description
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"This package provides user interface and database connection code for
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annotation data packages using SQLite data storage.")
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(license license:artistic2.0)))
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(define-public r-annotationforge
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(define-public r-annotationforge
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(package
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(package
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(name "r-annotationforge")
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(name "r-annotationforge")
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@ -7691,35 +7691,6 @@ including VCF header and contents in RDF and JSON.")
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(home-page "https://github.com/vcflib/bio-vcf")
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(home-page "https://github.com/vcflib/bio-vcf")
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(license license:expat)))
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(license license:expat)))
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(define-public r-annotationdbi
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(package
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(name "r-annotationdbi")
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(version "1.52.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "AnnotationDbi" version))
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(sha256
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(base32
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"0zqxgh3nx6y8ry12s2vss2f4axz5vpqxha1y4ifhhcx4zhpzsglr"))))
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(properties
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`((upstream-name . "AnnotationDbi")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)
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("r-biocgenerics" ,r-biocgenerics)
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("r-dbi" ,r-dbi)
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("r-iranges" ,r-iranges)
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("r-rsqlite" ,r-rsqlite)
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("r-s4vectors" ,r-s4vectors)))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/AnnotationDbi")
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(synopsis "Annotation database interface")
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(description
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"This package provides user interface and database connection code for
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annotation data packages using SQLite data storage.")
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(license license:artistic2.0)))
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(define-public r-biomart
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(define-public r-biomart
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(package
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(package
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(name "r-biomart")
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(name "r-biomart")
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