gnu: Add python-cwl-utils.
* gnu/packages/bioinformatics.scm (python-cwl-utils): New variable. Change-Id: I9347c80c0e866b89a7d432091fbcf1bc009209a5 Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>master
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@ -5182,6 +5182,49 @@ code formatter. It outputs CWL in a standardized YAML format.")
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and v1.1 to v1.2.")
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(license license:asl2.0)))
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(define-public python-cwl-utils
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(package
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(name "python-cwl-utils")
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(version "0.32")
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(source
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(origin
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(method url-fetch)
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(uri (pypi-uri "cwl-utils" version))
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(sha256
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(base32
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"06wkw8d8cqm3hnz8xwnysz874gwaym36c358cr7frw5iglhvsj98"))))
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(build-system pyproject-build-system)
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(arguments
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(list
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#:test-flags
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#~(list "-k"
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(string-append "not test_graph_split"
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" and not test_load_document_with_remote_uri"
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" and not test_remote_packing"
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" and not test_remote_packing_github_soft_links"
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" and not test_value_from_two_concatenated_expressions"))))
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(inputs
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(list node))
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(native-inputs
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(list python-mypy-extensions
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python-pytest
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python-pytest-mock
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python-pytest-runner))
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(propagated-inputs
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(list python-cwl-upgrader
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python-cwlformat
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python-packaging
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python-rdflib
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python-requests
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python-ruamel.yaml
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python-schema-salad))
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(home-page "https://github.com/common-workflow-language/cwl-utils")
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(synopsis "Python utilities for CWL")
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(description "@code{python-cwl-utils} provides python utilities and
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autogenerated classes for loading and parsing CWL v1.0, CWL v1.1, and CWL v1.2
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documents.")
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(license license:asl2.0)))
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(define-public cwltool
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(package
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(name "cwltool")
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