me
/
guix
Archived
1
0
Fork 0
Code

gnu: tbsp: Update to 1.0.0-2.dc30c03. 

* gnu/packages/bioinformatics.scm (tbsp): Update to 1.0.0-2.dc30c03.
[arguments]: Relax requirement on matplot.  This may turn out to be a mistake.
[inputs]: Replace python-biopython with python-biopython-1.73.
master
Ricardo Wurmus 2021-12-08 13:16:54 +01:00
parent 1f7c06965c
commit 1f63c46a1c
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 12 additions and 5 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

17
gnu/packages/bioinformatics.scm
View File

@ -13946,8 +13946,8 @@ and reflect the fast5 file schema, and tools to convert between
(license license:mpl2.0)))
(define-public tbsp
(let ((commit "ec8fff4410cfb13a677dbbb95cbbc60217e64907")
(revision "1"))
(let ((commit "dc30c03868233c5504299c9cb0d7b2064ba9cb41")
(revision "2"))
(package
(name "tbsp")
(version (git-version "1.0.0" revision commit))
@ -13960,15 +13960,22 @@ and reflect the fast5 file schema, and tools to convert between
(file-name (git-file-name name version))
(sha256
(base32
"025ym14x8gbd6hb55lsinqj6f5qzw36i10klgs7ldzxxd7s39ki1"))))
"1im0bik2hxkcb7jzkcxp5nqb30hd8lfraxml6i5ik52j6z3qqln1"))))
(build-system python-build-system)
(arguments '(#:tests? #f)) ; no tests included
(arguments
'(#:tests? #f ; no tests included
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'relax-requirements
(lambda _
(substitute* "setup.py"
((", <3.0") ""))))))) ; matplotlib
(inputs
`(("python-matplotlib" ,python-matplotlib)
("python-networkx" ,python-networkx)
("python-numpy" ,python-numpy)
("python-pybigwig" ,python-pybigwig)
("python-biopython" ,python-biopython)
("python-biopython" ,python-biopython-1.73)
("python-scikit-learn" ,python-scikit-learn)
("python-scipy" ,python-scipy)))
(home-page "https://github.com/phoenixding/tbsp/")