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gnu: r-chipseeker: Update to 1.36.0.

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* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.36.0.
[propagated-inputs]: Remove r-ggvenndiagram and r-rcolorbrewer; add r-aplot, r-tibble,
and r-yulab-utils.
This commit is contained in:
Ricardo Wurmus 2023-04-28 17:59:52 +02:00
parent 6c700d8b3a
commit 219901a7b2
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GPG key ID: 197A5888235FACAC
1 changed files with 6 additions and 5 deletions
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11
gnu/packages/bioconductor.scm
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@ -6092,18 +6092,19 @@ regions and to highlight copy number alterations.")
(define-public r-chipseeker (define-public r-chipseeker
(package (package
(name "r-chipseeker") (name "r-chipseeker")
(version "1.34.1") (version "1.36.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "ChIPseeker" version)) (uri (bioconductor-uri "ChIPseeker" version))
(sha256 (sha256
(base32 (base32
"0jr9mc79di0r3xrc7m27vwk85qa4fpcwp4nb77pr9s6jbv23773r")))) "0nngygci1g8bb3rsica348zi59hskr6hf8319csia6cman89gvqm"))))
(build-system r-build-system) (build-system r-build-system)
(native-inputs (native-inputs
(list r-knitr)) (list r-knitr))
(propagated-inputs (propagated-inputs
(list r-annotationdbi (list r-annotationdbi
r-aplot
r-biocgenerics r-biocgenerics
r-boot r-boot
r-enrichplot r-enrichplot
@ -6112,17 +6113,17 @@ regions and to highlight copy number alterations.")
r-genomicranges r-genomicranges
r-genomicfeatures r-genomicfeatures
r-ggplot2 r-ggplot2
r-ggvenndiagram
r-gplots r-gplots
r-gtools r-gtools
r-dplyr r-dplyr
r-plotrix r-plotrix
r-dplyr r-dplyr
r-magrittr r-magrittr
r-rcolorbrewer
r-rtracklayer r-rtracklayer
r-s4vectors r-s4vectors
r-txdb-hsapiens-ucsc-hg19-knowngene)) r-tibble
r-txdb-hsapiens-ucsc-hg19-knowngene
r-yulab-utils))
(home-page "https://www.bioconductor.org/packages/ChIPseeker/") (home-page "https://www.bioconductor.org/packages/ChIPseeker/")
(synopsis "ChIPseeker for ChIP peak annotation, comparison, and visualization") (synopsis "ChIPseeker for ChIP peak annotation, comparison, and visualization")
(description "This package implements functions to retrieve the nearest (description "This package implements functions to retrieve the nearest