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gnu: python-scipy: Update to 1.6.0. 

* gnu/packages/python-xyz.scm (python-scipy): Update to 1.6.0.
[inputs]: Add pybind11.
[arguments]<#:phases>['change-home-dir]: New phase.

Signed-off-by: Jelle Licht <jlicht@fsfe.org>
master
Greg Hogan 2021-01-05 17:09:15 +00:00 committed by Jelle Licht
parent 5e01f68a93
commit 2571cf025e
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1 changed files with 10 additions and 3 deletions
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gnu/packages/python-science.scm
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@ -10,6 +10,7 @@
;;; Copyright © 2019 Giacomo Leidi <goodoldpaul@autistici.org> ;;; Copyright © 2019 Giacomo Leidi <goodoldpaul@autistici.org>
;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com> ;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2020 Vinicius Monego <monego@posteo.net> ;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2021 Greg Hogan <code@greghogan.com>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -50,13 +51,13 @@
(define-public python-scipy (define-public python-scipy
(package (package
(name "python-scipy") (name "python-scipy")
(version "1.3.2") (version "1.6.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (pypi-uri "scipy" version)) (uri (pypi-uri "scipy" version))
(sha256 (sha256
(base32 "192d8dsybvhv19igkrsafbdafx198nz7pibkjgrqjhlr66s3jfd0")))) (base32 "0rh5b1rwdcvvagld8vpxnpaibszy1skpx39a0fwzd5gx5pwcjvfb"))))
(build-system python-build-system) (build-system python-build-system)
(propagated-inputs (propagated-inputs
`(("python-numpy" ,python-numpy) `(("python-numpy" ,python-numpy)
@ -64,7 +65,8 @@
("python-pyparsing" ,python-pyparsing))) ("python-pyparsing" ,python-pyparsing)))
(inputs (inputs
`(("lapack" ,lapack) `(("lapack" ,lapack)
("openblas" ,openblas))) ("openblas" ,openblas)
("pybind11" ,pybind11)))
(native-inputs (native-inputs
`(("python-cython" ,python-cython) `(("python-cython" ,python-cython)
("python-pytest" ,python-pytest) ("python-pytest" ,python-pytest)
@ -77,6 +79,11 @@
(arguments (arguments
`(#:phases `(#:phases
(modify-phases %standard-phases (modify-phases %standard-phases
(add-before 'build 'change-home-dir
(lambda _
;; Change from /homeless-shelter to /tmp for write permission.
(setenv "HOME" "/tmp")
#t))
(add-after 'unpack 'disable-broken-tests (add-after 'unpack 'disable-broken-tests
(lambda _ (lambda _
(substitute* "scipy/sparse/linalg/dsolve/tests/test_linsolve.py" (substitute* "scipy/sparse/linalg/dsolve/tests/test_linsolve.py"