From 279dd07d9781caafa2d170f7d72c0d3e8a0cac1c Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 7 May 2024 12:32:58 +0200 Subject: [PATCH] gnu: r-genomeinfodb: Update to 1.40.0. * gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.40.0. [propagated-inputs]: Remove r-rcurl; add r-ucsc-utils. Change-Id: I5146dbd585fa622b50879832bdaa0034c38fd4ba --- gnu/packages/bioconductor.scm | 7 ++++--- 1 file changed, 4 insertions(+), 3 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index cb6a946536..79629ab0e9 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8119,18 +8119,19 @@ genomic intervals. In addition, it can use BAM or BigWig files as input.") (define-public r-genomeinfodb (package (name "r-genomeinfodb") - (version "1.38.8") + (version "1.40.0") (source (origin (method url-fetch) (uri (bioconductor-uri "GenomeInfoDb" version)) (sha256 (base32 - "126qq2549h3dpjiq36709pym5bfwk6jqbz5q2sb5hl8lwm1apv8w")))) + "12w3mgrv2rrlarpxws7m647akpscrqmzdsxnzl8hdicrh7wiydcx")))) (properties `((upstream-name . "GenomeInfoDb"))) (build-system r-build-system) (propagated-inputs - (list r-biocgenerics r-genomeinfodbdata r-iranges r-rcurl r-s4vectors)) + (list r-biocgenerics r-genomeinfodbdata r-iranges r-s4vectors + r-ucsc-utils)) (native-inputs (list r-knitr)) (home-page "https://bioconductor.org/packages/GenomeInfoDb")