gnu: Remove python-tslearn.
This package now lives in the guix-science channel. * gnu/packages/machine-learning.scm (python-tslearn): Remove variable. Change-Id: I655df3417d258cb1231746626817fde9628e9569master
parent
ddde736722
commit
287dee537b
|
@ -1776,73 +1776,6 @@ number of threads used in the threadpool-backed of common native libraries used
|
||||||
for scientific computing and data science (e.g. BLAS and OpenMP).")
|
for scientific computing and data science (e.g. BLAS and OpenMP).")
|
||||||
(license license:bsd-3)))
|
(license license:bsd-3)))
|
||||||
|
|
||||||
(define-public python-tslearn
|
|
||||||
(package
|
|
||||||
(name "python-tslearn")
|
|
||||||
(version "0.6.2")
|
|
||||||
(source (origin
|
|
||||||
(method git-fetch)
|
|
||||||
(uri (git-reference
|
|
||||||
(url "https://github.com/tslearn-team/tslearn")
|
|
||||||
(commit (string-append "v" version))))
|
|
||||||
(file-name (git-file-name name version))
|
|
||||||
(sha256
|
|
||||||
(base32
|
|
||||||
"0l9l21jy78mhajdfwyx8rskw08597vg55ff22bjkv6xrjjr9g4ac"))))
|
|
||||||
(build-system pyproject-build-system)
|
|
||||||
(arguments
|
|
||||||
(list
|
|
||||||
#:test-flags
|
|
||||||
'(list "-k"
|
|
||||||
(string-append
|
|
||||||
;; This one fails because of a difference in accuracy.
|
|
||||||
"not test_all_estimators[LearningShapelets-LearningShapelets]"
|
|
||||||
;; XXX: It's embarrassing to disable these two, but the truth is
|
|
||||||
;; that there's only so much we can do to force this package to
|
|
||||||
;; work with Tensorflow 1.9. It's still worth having this
|
|
||||||
;; package, because it can be used without the Tensorflow
|
|
||||||
;; backend.
|
|
||||||
;; TypeError: cannot pickle '_thread.RLock' object
|
|
||||||
" and not test_shapelets"
|
|
||||||
;; TypeError: Expected binary or unicode string, got 2
|
|
||||||
" and not test_serialize_shapelets"))
|
|
||||||
#:phases
|
|
||||||
'(modify-phases %standard-phases
|
|
||||||
(add-after 'unpack 'compatibility
|
|
||||||
(lambda _
|
|
||||||
(substitute* "tslearn/tests/sklearn_patches.py"
|
|
||||||
(("_pairwise_estimator_convert_X")
|
|
||||||
"_enforce_estimator_tags_X")
|
|
||||||
(("pairwise_estimator_convert_X\\(([^,]+), ([^,\\)]+)" _ a b)
|
|
||||||
(string-append "pairwise_estimator_convert_X(" b ", " a)))
|
|
||||||
(substitute* "tslearn/tests/test_shapelets.py"
|
|
||||||
(("tf.optimizers.Adam")
|
|
||||||
"tf.keras.optimizers.Adam"))
|
|
||||||
(substitute* "tslearn/shapelets/shapelets.py"
|
|
||||||
(("tf.keras.utils.set_random_seed")
|
|
||||||
"tf.set_random_seed")
|
|
||||||
(("def __call__\\(self, shape, dtype=None\\):")
|
|
||||||
"def __call__(self, shape, dtype=None, partition_info=None):")
|
|
||||||
(("tf.math.is_finite")
|
|
||||||
"tf.is_finite")))))))
|
|
||||||
(propagated-inputs (list python-cesium
|
|
||||||
python-h5py
|
|
||||||
python-joblib
|
|
||||||
python-numba
|
|
||||||
python-numpy
|
|
||||||
python-pandas
|
|
||||||
python-scipy
|
|
||||||
python-scikit-learn
|
|
||||||
tensorflow
|
|
||||||
python-wheel))
|
|
||||||
(native-inputs (list python-pytest))
|
|
||||||
(home-page "https://github.com/tslearn-team/tslearn")
|
|
||||||
(synopsis "Machine learning toolkit for time series data")
|
|
||||||
(description "This is a Python library for time series data mining.
|
|
||||||
It provides tools for time series classification, clustering
|
|
||||||
and forecasting.")
|
|
||||||
(license license:bsd-2)))
|
|
||||||
|
|
||||||
(define-public python-imbalanced-learn
|
(define-public python-imbalanced-learn
|
||||||
(package
|
(package
|
||||||
(name "python-imbalanced-learn")
|
(name "python-imbalanced-learn")
|
||||||
|
|
Reference in New Issue