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gnu: Add r-sesame.

* gnu/packages/bioconductor.scm (r-sesame): New variable.
Ricardo Wurmus 2023-08-28 18:03:46 +02:00
parent 6b1946d2e2
commit 28e9d08364
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1 changed files with 42 additions and 0 deletions

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@ -9649,6 +9649,48 @@ sequence motif occurrences across a large set of sequences centred at a common
reference point and sorted by a user defined feature.")
(license license:gpl3+)))
(define-public r-sesame
(package
(name "r-sesame")
(version "1.18.4")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "sesame" version))
(sha256
(base32
"1il33ygys6y72l8p3fhx301q16w9kylfy6w92b64n8gqkn6dmsmn"))))
(properties `((upstream-name . "sesame")))
(build-system r-build-system)
(propagated-inputs (list r-biocfilecache
r-biocparallel
r-dplyr
r-genomeinfodb
r-genomicranges
r-ggplot2
r-illuminaio
r-iranges
r-mass
r-preprocesscore
r-readr
r-reshape2
r-s4vectors
r-sesamedata
r-stringr
r-summarizedexperiment
r-tibble
r-wheatmap))
(native-inputs (list r-knitr))
(home-page "https://github.com/zwdzwd/sesame")
(synopsis "Step-wise analysis of DNA Methylation BeadChips")
(description
"This package provides tools For analyzing Illumina Infinium DNA
methylation arrays. @code{SeSAMe} provides utilities to support analyses of
multiple generations of Infinium DNA methylation @code{BeadChips}, including
preprocessing, quality control, visualization and inference. @code{SeSAMe}
features accurate detection calling, intelligent inference of ethnicity, sex
and advanced quality control routines.")
(license license:expat)))
(define-public r-shinymethyl
(package
(name "r-shinymethyl")