gnu: Add r-sesame.
* gnu/packages/bioconductor.scm (r-sesame): New variable.
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@ -9649,6 +9649,48 @@ sequence motif occurrences across a large set of sequences centred at a common
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reference point and sorted by a user defined feature.")
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reference point and sorted by a user defined feature.")
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(license license:gpl3+)))
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(license license:gpl3+)))
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(define-public r-sesame
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(package
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(name "r-sesame")
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(version "1.18.4")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "sesame" version))
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(sha256
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(base32
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"1il33ygys6y72l8p3fhx301q16w9kylfy6w92b64n8gqkn6dmsmn"))))
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(properties `((upstream-name . "sesame")))
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(build-system r-build-system)
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(propagated-inputs (list r-biocfilecache
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r-biocparallel
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r-dplyr
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r-genomeinfodb
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r-genomicranges
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r-ggplot2
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r-illuminaio
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r-iranges
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r-mass
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r-preprocesscore
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r-readr
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r-reshape2
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r-s4vectors
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r-sesamedata
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r-stringr
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r-summarizedexperiment
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r-tibble
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r-wheatmap))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/zwdzwd/sesame")
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(synopsis "Step-wise analysis of DNA Methylation BeadChips")
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(description
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"This package provides tools For analyzing Illumina Infinium DNA
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methylation arrays. @code{SeSAMe} provides utilities to support analyses of
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multiple generations of Infinium DNA methylation @code{BeadChips}, including
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preprocessing, quality control, visualization and inference. @code{SeSAMe}
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features accurate detection calling, intelligent inference of ethnicity, sex
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and advanced quality control routines.")
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(license license:expat)))
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(define-public r-shinymethyl
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(define-public r-shinymethyl
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(package
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(package
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(name "r-shinymethyl")
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(name "r-shinymethyl")
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