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gnu: python-pymol: Fix launch script. 

* gnu/packages/chemistry.scm (python-pymol)[#:phases]: Add 'disable-unchroot.
[native-inputs]: Remove python-setuptools.

Signed-off-by: Andreas Enge <andreas@enge.fr>
David Elsing 2023-07-03 21:31:10 +00:00 committed by Andreas Enge
parent 9ca9b0afb6
commit 2e3edb38a5
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1 changed files with 8 additions and 3 deletions
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11
gnu/packages/chemistry.scm
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@ -6,7 +6,7 @@
;;; Copyright © 2020 Björn Höfling <bjoern.hoefling@bjoernhoefling.de> ;;; Copyright © 2020 Björn Höfling <bjoern.hoefling@bjoernhoefling.de>
;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com> ;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
;;; Copyright © 2021 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2022 David Elsing <david.elsing@posteo.net> ;;; Copyright © 2022, 2023 David Elsing <david.elsing@posteo.net>
;;; ;;;
;;; This file is part of GNU Guix. ;;; This file is part of GNU Guix.
;;; ;;;
@ -554,6 +554,12 @@ symmetries written in C. Spglib can be used to:
(assoc-ref inputs "libxml2") (assoc-ref inputs "libxml2")
"/include/libxml2:" "/include/libxml2:"
(getenv "CPLUS_INCLUDE_PATH"))))) (getenv "CPLUS_INCLUDE_PATH")))))
;; Prevent deleting the leading / in the __init__.py path in the
;; launch script.
(add-after 'unpack 'disable-unchroot
(lambda _
(substitute* "setup.py"
(("self\\.unchroot") ""))))
;; The setup.py script does not support one of the Python build ;; The setup.py script does not support one of the Python build
;; system's default flags, "--single-version-externally-managed". ;; system's default flags, "--single-version-externally-managed".
(replace 'install (replace 'install
@ -572,8 +578,7 @@ symmetries written in C. Spglib can be used to:
python-pyqt python-pyqt
glm glm
netcdf)) netcdf))
(native-inputs (native-inputs (list catch2))
(list catch2 python-setuptools))
(home-page "https://pymol.org") (home-page "https://pymol.org")
(synopsis "Molecular visualization system") (synopsis "Molecular visualization system")
(description "PyMOL is a capable molecular viewer and renderer. It can be (description "PyMOL is a capable molecular viewer and renderer. It can be