me
/
guix
Archived
1
0
Fork 0

gnu: fastahack: Update to 1.0.0.

* gnu/packages/bioinformatics.scm (fastahack): Update to 1.0.0.
master
Efraim Flashner 2020-01-08 11:58:45 +02:00
parent de933b71ee
commit 2e3efa6e55
No known key found for this signature in database
GPG Key ID: 41AAE7DCCA3D8351
1 changed files with 26 additions and 27 deletions

View File

@ -15055,37 +15055,36 @@ neural networks.")
(license license:gpl3))))
(define-public fastahack
(let ((commit "c68cebb4f2e5d5d2b70cf08fbdf1944e9ab2c2dd"))
(package
(name "fastahack")
(version (git-version "0.0.0" "1" commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ekg/fastahack/")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "0hfdv67l9g611i2ck4l92pd6ygmsp9g1ph4zx1ni7qkpsikf0l19"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; Unclear how to run tests: https://github.com/ekg/fastahack/issues/15
#:phases
(modify-phases %standard-phases
(delete 'configure) ; There is no configure phase.
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let ((bin (string-append (assoc-ref outputs "out") "/bin")))
(install-file "fastahack" bin))
#t)))))
(home-page "https://github.com/ekg/fastahack")
(synopsis "Indexing and sequence extraction from FASTA files")
(description "Fastahack is a small application for indexing and
(package
(name "fastahack")
(version "1.0.0")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/ekg/fastahack/")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0rp1blskhzxf7vbh253ibpxbgl9wwgyzf1wbkxndi08d3j4vcss9"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; Unclear how to run tests: https://github.com/ekg/fastahack/issues/15
#:phases
(modify-phases %standard-phases
(delete 'configure) ; There is no configure phase.
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let ((bin (string-append (assoc-ref outputs "out") "/bin")))
(install-file "fastahack" bin))
#t)))))
(home-page "https://github.com/ekg/fastahack")
(synopsis "Indexing and sequence extraction from FASTA files")
(description "Fastahack is a small application for indexing and
extracting sequences and subsequences from FASTA files. The included library
provides a FASTA reader and indexer that can be embedded into applications
which would benefit from directly reading subsequences from FASTA files. The
library automatically handles index file generation and use.")
(license (list license:expat license:gpl2)))))
(license (list license:expat license:gpl2))))
(define-public vcflib
(let ((commit "5ac091365fdc716cc47cc5410bb97ee5dc2a2c92")