gnu: Add r-escape.
* gnu/packages/bioconductor.scm (r-escape): New variable. Change-Id: Ia308f9c90fa81c3304f97daa4f56ae4cd722d5ccmaster
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@ -1127,6 +1127,46 @@ Ensembl.")
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Ensembl.")
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Ensembl.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-escape
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(package
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(name "r-escape")
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(version "1.12.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "escape" version))
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(sha256
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(base32 "0bmin69ax7l5x3a0k9mv183277a0hl4znx02y79v2ilkgqkdm7fn"))))
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(properties `((upstream-name . "escape")))
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(build-system r-build-system)
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(propagated-inputs (list r-biocparallel
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r-broom
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r-data-table
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r-dplyr
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r-ggplot2
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r-ggridges
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r-gseabase
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r-gsva
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r-matrix
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r-matrixgenerics
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r-msigdbr
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r-patchwork
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r-reshape2
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r-rlang
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r-singlecellexperiment
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r-stringr
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r-summarizedexperiment
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r-ucell))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/escape")
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(synopsis "Single cell analysis platform for enrichment")
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(description
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"R-escape streamlines gene set enrichment analysis for single-cell RNA
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sequencing. Using raw count information, Seurat objects, or
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@code{SingleCellExperiment} format, users can perform and visualize GSEA
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across individual cells.")
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(license license:gpl2)))
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(define-public r-snplocs-hsapiens-dbsnp144-grch37
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(define-public r-snplocs-hsapiens-dbsnp144-grch37
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(package
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(package
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(name "r-snplocs-hsapiens-dbsnp144-grch37")
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(name "r-snplocs-hsapiens-dbsnp144-grch37")
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