gnu: macs: Update to 2.2.9.1.
* gnu/packages/bioinformatics.scm (macs): Update to 2.2.9.1. [build-system]: Use pyproject-build-system. [arguments]: Remove custom 'check phase. [native-inputs]: Move python-cython from here... [inputs]: ...and python-numpy from here... [propagated-inputs]: ...to here.
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					 1 changed files with 8 additions and 12 deletions
				
			
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			@ -7023,7 +7023,7 @@ experiments.")
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(define-public macs
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  (package
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    (name "macs")
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    (version "2.2.7.1")
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    (version "2.2.9.1")
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    (source (origin
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              ;; The PyPi tarball does not contain tests.
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              (method git-fetch)
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			@ -7033,7 +7033,7 @@ experiments.")
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              (file-name (git-file-name name version))
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              (sha256
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               (base32
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                "08zsgh65xbpv1md2s3wqmrk9g2mz6izmn59ryw5lbac54120p291"))
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                "10vwc09fq4nvbd39hax1949mvq2wvkgz0k3p2zqmqwq8hv9r5l0j"))
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        (modules '((guix build utils)))
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        ;; Remove files generated by Cython
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        (snippet
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			@ -7048,21 +7048,17 @@ experiments.")
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            ;; Python 3.10 is in fact more recent than 3.6.
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            (substitute* "setup.py"
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              (("float\\(sys.version\\[:3\\]\\)<3.6") "False"))))))
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    (build-system python-build-system)
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    (build-system pyproject-build-system)
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    (arguments
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     `(#:phases
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       (modify-phases %standard-phases
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         (add-before 'build 'set-HOME
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           (lambda _ (setenv "HOME" "/tmp")))
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         (replace 'check
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           (lambda* (#:key tests? inputs outputs #:allow-other-keys)
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             (when tests?
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               (add-installed-pythonpath inputs outputs)
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               (invoke "pytest" "-v")))))))
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    (inputs
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     (list python-numpy))
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           (lambda _ (setenv "HOME" "/tmp"))))))
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    ;; Propagate these for use of macs as a library.
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    (propagated-inputs
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     (list python-cython python-numpy))
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    (native-inputs
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     (list python-cython python-pytest))
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     (list python-pytest))
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    (home-page "https://github.com/macs3-project/MACS")
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    (synopsis "Model based analysis for ChIP-Seq data")
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    (description
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