gnu: Add r-bioqc.
* gnu/packages/bioconductor.scm (r-bioqc): New variable.
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@ -14408,6 +14408,34 @@ analysis, differential node analysis (differential coexpression analysis),
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network and metabolic pathways view.")
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(license license:gpl3+)))
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(define-public r-bioqc
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(package
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(name "r-bioqc")
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(version "1.20.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "BioQC" version))
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(sha256
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(base32
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"04akp94p0d0zid55m1b1k3qlw7iq914pcg57lihgj3pa92n1sc5l"))))
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(properties `((upstream-name . "BioQC")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biobase" ,r-biobase)
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("r-edger" ,r-edger)
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("r-rcpp" ,r-rcpp)))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "https://accio.github.io/BioQC/")
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(synopsis "Detect tissue heterogeneity in expression profiles with gene sets")
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(description
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"BioQC performs quality control of high-throughput expression data based
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on tissue gene signatures. It can detect tissue heterogeneity in gene
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expression data. The core algorithm is a Wilcoxon-Mann-Whitney test that is
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optimised for high performance.")
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(license license:gpl3+)))
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(define-public r-tximeta
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(package
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(name "r-tximeta")
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