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gnu: tabixpp: Build and install shared library and headers. 

* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Adjust custom
'build phase to build shared library. Adjust custom 'install phase to
install libraries and header.
master
Efraim Flashner 2020-08-27 18:02:16 +03:00
parent 3dd310087a
commit 35cb1bc527
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1 changed files with 11 additions and 4 deletions
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gnu/packages/bioinformatics.scm
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@ -15400,12 +15400,19 @@ mutations from scRNA-Seq data.")
(string-append "HTS_LIB=" htslib-ref "/lib/libhts.a")
(string-append "INCLUDES= -I" htslib-ref "/include/htslib")
"HTS_HEADERS=" ; No need to check for headers here.
(string-append "LIBPATH=-L. -L" htslib-ref "/include")))))
(string-append "LIBPATH=-L. -L" htslib-ref "/include"))
(invoke "g++" "-shared" "-o" "libtabixpp.so" "tabix.o" "-lhts")
(invoke "ar" "rcs" "libtabixpp.a" "tabix.o"))))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(let ((bin (string-append (assoc-ref outputs "out") "/bin")))
(install-file "tabix++" bin))
#t)))))
(let* ((out (assoc-ref outputs "out"))
(lib (string-append out "/lib"))
(bin (string-append out "/bin")))
(install-file "tabix++" bin)
(install-file "libtabixpp.so" lib)
(install-file "libtabixpp.a" lib)
(install-file "tabix.hpp" (string-append out "/include"))
#t))))))
(home-page "https://github.com/ekg/tabixpp")
(synopsis "C++ wrapper around tabix project")
(description "This is a C++ wrapper around the Tabix project which abstracts