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gnu: r-rhdf5filters: Simplify.

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* gnu/packages/bioconductor.scm (r-rhdf5filters)[arguments]: Remove
'use-system-libraries phase and pass configure flags to disable bundled
libraries.

Change-Id: I2fb115e7b3df00cccb3f8d6659d465075d21f19b
This commit is contained in:
Ricardo Wurmus 2023-11-03 19:44:57 +01:00
parent 78641cf9da
commit 38b5777ec8
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GPG key ID: 197A5888235FACAC
1 changed files with 2 additions and 18 deletions
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gnu/packages/bioconductor.scm
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@ -9710,24 +9710,8 @@ the available RAM.")
(build-system r-build-system)
(arguments
(list
#:phases
#~(modify-phases %standard-phases
(add-after 'unpack 'use-system-libraries
(lambda _
(substitute* "src/blosc/Makefile.in"
(("libblosc.a: blosc") "libwhatever.a:")
(("libblosc.a")
(string-append #$(this-package-input "c-blosc")
"/lib/libblosc.so"))
(("../zstd/libzstd.a") "-lzstd"))
(substitute* "src/bzip2/Makefile"
(("libH5Zbz2.so: bzip2-1.0.8/libbz2.a") "libH5Zbz2.so:")
(("./bzip2-1.0.8/libbz2.a") "-lbz2"))
(substitute* "src/zstd/Makefile"
(("libH5Zzstd.so: libzstd.a") "libH5Zzstd.so:")
(("libzstd.a") "-lzstd"))
(substitute* "src/vbz/Makefile"
(("../zstd/libzstd.a") "-lzstd")))))))
#:configure-flags
'(list "--without-bundled-libs")))
(propagated-inputs
(list r-rhdf5lib))
(inputs