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@ -15335,3 +15335,33 @@ an approach to manipulate these two virtual data frames using the API defined
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in the @code{dplyr} package, and it also provides tidy interfaces to a lot of
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common graph algorithms.")
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(license license:expat)))
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(define-public r-soupx
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(let ((commit "a3354be76fb52fd795be6ddf163cf056c05c6cb8")
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(revision "1"))
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(package
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(name "r-soupx")
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(version (git-version "0.3.1" revision commit))
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/constantAmateur/SoupX")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"1zmlyzrl0fz6l79gn2wswid670p88mm3y292is89sa5p3h7frr99"))))
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(properties `((upstream-name . "SoupX")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-ggplot2" ,r-ggplot2)
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("r-matrix" ,r-matrix)
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("r-seurat" ,r-seurat)))
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(home-page "https://github.com/constantAmateur/SoupX")
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(synopsis "Single cell mRNA Soup eXterminator")
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(description
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"This package provides a package for quantifying, profiling and
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removing cell free mRNA contamination (the \"soup\") from droplet based single
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cell RNA-seq experiments.")
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(license license:gpl2))))
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