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gnu: Add r-soupx.

* gnu/packages/cran.scm (r-soupx): New variable.
master
Ricardo Wurmus 2019-09-09 11:25:02 +02:00
parent c10a27a268
commit 3a341e822c
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@ -15335,3 +15335,33 @@ an approach to manipulate these two virtual data frames using the API defined
in the @code{dplyr} package, and it also provides tidy interfaces to a lot of
common graph algorithms.")
(license license:expat)))
(define-public r-soupx
(let ((commit "a3354be76fb52fd795be6ddf163cf056c05c6cb8")
(revision "1"))
(package
(name "r-soupx")
(version (git-version "0.3.1" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/constantAmateur/SoupX")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1zmlyzrl0fz6l79gn2wswid670p88mm3y292is89sa5p3h7frr99"))))
(properties `((upstream-name . "SoupX")))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
("r-matrix" ,r-matrix)
("r-seurat" ,r-seurat)))
(home-page "https://github.com/constantAmateur/SoupX")
(synopsis "Single cell mRNA Soup eXterminator")
(description
"This package provides a package for quantifying, profiling and
removing cell free mRNA contamination (the \"soup\") from droplet based single
cell RNA-seq experiments.")
(license license:gpl2))))