gnu: biber -> texlive-biber.
Build from sources provided by TeX Live distribution, so they always match BibLaTeX version. * gnu/packages/patches/biber-adapt-perl-5.36.patch: Delete file. * gnu/local.mk: Apply removal. * gnu/packages/tex.scm (texlive-biber): New variable. (biber): Deprecate variable. (perl-text-bibtex): Move from here... * gnu/packages/perl.scm (perl-text-bibtex): ... to here.
Nicolas Goaziou
parent
aea0d94bc1
commit
3aeca58073
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@ -957,7 +957,6 @@ dist_patch_DATA = \
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%D%/packages/patches/bsd-games-stdio.h.patch \
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%D%/packages/patches/beancount-disable-googleapis-fonts.patch \
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%D%/packages/patches/beignet-correct-file-names.patch \
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%D%/packages/patches/biber-adapt-perl-5.36.patch \
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%D%/packages/patches/bidiv-update-fribidi.patch \
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%D%/packages/patches/binutils-boot-2.20.1a.patch \
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%D%/packages/patches/binutils-loongson-workaround.patch \
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@ -1,40 +0,0 @@
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From d9e961710074d266ad6bdf395c98868d91952088 Mon Sep 17 00:00:00 2001
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From: =?UTF-8?q?Petr=20P=C3=ADsa=C5=99?= <ppisar@redhat.com>
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Date: Wed, 25 May 2022 12:41:59 +0200
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Subject: [PATCH] Adapt to Perl 5.36
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A developmental release of Perl 5.36.0 fails to run tests with:
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$ perl -Ilib t/basic-misc.t
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1..72
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Can't modify undef operator in scalar assignment at lib/Biber/Section.pm line 433, near "undef;"
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Compilation failed in require at lib/Biber.pm line 24.
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BEGIN failed--compilation aborted at lib/Biber.pm line 24.
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Compilation failed in require at t/basic-misc.t line 11.
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BEGIN failed--compilation aborted at t/basic-misc.t line 11.
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# Looks like your test exited with 255 before it could output anything.
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This is because of a missing semicolon between commands in
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del_everykeys(). The new perl is more strict and raises a compile-time
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error:
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$ perl -e '$a = undef $b = undef;'
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Can't modify undef operator in scalar assignment at -e line 1, near "undef;"
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Execution of -e aborted due to compilation errors.
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---
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lib/Biber/Section.pm | 2 +-
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1 file changed, 1 insertion(+), 1 deletion(-)
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diff --git a/lib/Biber/Section.pm b/lib/Biber/Section.pm
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index 03ed69a51..a78942f57 100644
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--- a/lib/Biber/Section.pm
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+++ b/lib/Biber/Section.pm
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@@ -429,7 +429,7 @@ sub add_everykey {
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sub del_everykeys {
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my $self = shift;
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- $self->{everykey} = undef
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+ $self->{everykey} = undef;
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$self->{everykey_lc} = undef;
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return;
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}
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@ -10631,6 +10631,46 @@ used to justify strings to various alignment styles.")
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text sequences from strings.")
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(license (package-license perl))))
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(define-public perl-text-bibtex
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(package
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(name "perl-text-bibtex")
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(version "0.88")
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(source
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(origin
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(method url-fetch)
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(uri (string-append "mirror://cpan/authors/id/A/AM/AMBS/Text-BibTeX-"
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version ".tar.gz"))
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(sha256
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(base32
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"0b7lmjvfmypps1nw6nsdikgaakm0n0g4186glaqazg5xd1p5h55h"))))
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(build-system perl-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(add-after 'unpack 'add-output-directory-to-rpath
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(lambda* (#:key outputs #:allow-other-keys)
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(substitute* "inc/MyBuilder.pm"
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(("-Lbtparse" line)
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(string-append "-Wl,-rpath="
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(assoc-ref outputs "out") "/lib " line)))
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#t))
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(add-after 'unpack 'install-libraries-to-/lib
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(lambda* (#:key outputs #:allow-other-keys)
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(substitute* "Build.PL"
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(("lib64") "lib"))
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#t)))))
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(native-inputs
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(list perl-capture-tiny perl-config-autoconf perl-extutils-libbuilder
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perl-module-build))
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(home-page "https://metacpan.org/release/Text-BibTeX")
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(synopsis "Interface to read and parse BibTeX files")
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(description "@code{Text::BibTeX} is a Perl library for reading, parsing,
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and processing BibTeX files. @code{Text::BibTeX} gives you access to the data
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at many different levels: you may work with BibTeX entries as simple field to
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string mappings, or get at the original form of the data as a list of simple
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values (strings, macros, or numbers) pasted together.")
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(license license:perl-license)))
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(define-public perl-text-charwidth
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(package
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(name "perl-text-charwidth")
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@ -9515,78 +9515,56 @@ This package contains the complete TeX Live distribution.")
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(license (license:fsf-free "https://www.tug.org/texlive/copying.html"))
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(home-page "https://www.tug.org/texlive/")))
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(define-public perl-text-bibtex
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(define-public texlive-biber
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(package
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(name "perl-text-bibtex")
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(version "0.88")
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(source
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(origin
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(method url-fetch)
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(uri (string-append "mirror://cpan/authors/id/A/AM/AMBS/Text-BibTeX-"
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version ".tar.gz"))
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(sha256
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(base32
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"0b7lmjvfmypps1nw6nsdikgaakm0n0g4186glaqazg5xd1p5h55h"))))
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(build-system perl-build-system)
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(name "texlive-biber")
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(version (number->string %texlive-revision))
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(source (texlive-origin
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name version
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(list "doc/bibtex/biber/" "source/bibtex/biber/")
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(base32
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"0i1hqr9zb7b9d1zjlyg4awa6mkyq6wnrb6z4689j1rg07vnbd7mw")))
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(outputs '("out" "doc"))
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(build-system texlive-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(add-after 'unpack 'add-output-directory-to-rpath
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(lambda* (#:key outputs #:allow-other-keys)
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(substitute* "inc/MyBuilder.pm"
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(("-Lbtparse" line)
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(string-append "-Wl,-rpath="
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(assoc-ref outputs "out") "/lib " line)))
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#t))
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(add-after 'unpack 'install-libraries-to-/lib
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(lambda* (#:key outputs #:allow-other-keys)
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(substitute* "Build.PL"
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(("lib64") "lib"))
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#t)))))
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(list
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#:tests? #true
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#:imported-modules `(,@%texlive-build-system-modules
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(guix build perl-build-system))
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#:modules '((guix build texlive-build-system)
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((guix build perl-build-system) #:prefix perl:)
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(guix build utils))
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'unpack-biber-source
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(lambda _
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(mkdir-p "build")
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(with-directory-excursion "build"
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(invoke "tar" "xvf"
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"../source/bibtex/biber/biblatex-biber.tar.gz"
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"--strip-components=1"))))
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(add-after 'unpack-biber-source 'build-biber
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(lambda args
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(with-directory-excursion "build"
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(for-each (lambda (phase)
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(apply (assoc-ref perl:%standard-phases phase) args))
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'(configure build check install)))))
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(add-after 'install 'wrap-programs
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(lambda _
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(let ((perl5lib (getenv "PERL5LIB")))
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(wrap-program (string-append #$output "/bin/biber")
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`("PERL5LIB" ":" prefix
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(,(string-append perl5lib ":"
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#$output "/lib/perl5/site_perl"))))))))))
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(native-inputs
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(list perl-capture-tiny perl-config-autoconf perl-extutils-libbuilder
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perl-module-build))
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(home-page "https://metacpan.org/release/Text-BibTeX")
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(synopsis "Interface to read and parse BibTeX files")
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(description "@code{Text::BibTeX} is a Perl library for reading, parsing,
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and processing BibTeX files. @code{Text::BibTeX} gives you access to the data
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at many different levels: you may work with BibTeX entries as simple field to
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string mappings, or get at the original form of the data as a list of simple
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values (strings, macros, or numbers) pasted together.")
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(license license:perl-license)))
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(define-public biber
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(package
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;; Note: When updating Biber, make sure it matches our BibLaTeX version by
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;; checking the Biber/BibLaTeX compatibility matrix in the BibLaTeX manual
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;; at <https://ctan.org/pkg/biblatex>.
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(name "biber")
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(version "2.16")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/plk/biber/")
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(commit (string-append "v" version))))
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(file-name (git-file-name name version))
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(sha256
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(base32
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"0586q8y1f2k23mvb02ccm3qsb35cwskafksixsjaih7a7xcf5gxx"))
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(patches (search-patches "biber-adapt-perl-5.36.patch"))))
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(build-system perl-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(add-after 'install 'wrap-programs
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(lambda* (#:key outputs #:allow-other-keys)
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(let* ((out (assoc-ref outputs "out"))
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(perl5lib (getenv "PERL5LIB")))
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(wrap-program (string-append out "/bin/biber")
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`("PERL5LIB" ":" prefix
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(,(string-append perl5lib ":" out
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"/lib/perl5/site_perl")))))
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#t)))))
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(list perl-config-autoconf
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perl-extutils-libbuilder
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perl-file-which
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perl-module-build
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perl-test-differences))
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(inputs
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(list perl-autovivification
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(list perl
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perl-autovivification
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perl-class-accessor
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perl-data-dump
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perl-data-compare
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@ -9625,19 +9603,15 @@ values (strings, macros, or numbers) pasted together.")
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perl-business-issn
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perl-business-ismn
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perl-lingua-translit))
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(native-inputs
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`(("perl-config-autoconf" ,perl-config-autoconf)
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("perl-extutils-libbuilder" ,perl-extutils-libbuilder)
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("perl-module-build" ,perl-module-build)
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;; for tests
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("perl-file-which" ,perl-file-which)
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("perl-test-more" ,perl-test-most) ; FIXME: "more" would be sufficient
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("perl-test-differences" ,perl-test-differences)))
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(home-page "https://biblatex-biber.sourceforge.net/")
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(synopsis "Backend for the BibLaTeX citation management tool")
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(description "Biber is a BibTeX replacement for users of biblatex. Among
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other things it comes with full Unicode support.")
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(license license:artistic2.0)))
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(home-page "https://ctan.org/pkg/biber")
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(synopsis "BibTeX replacement for users of BibLaTeX")
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(description
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"Biber is a BibTeX replacement for users of BibLaTeX. It supports full
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UTF-8, can (re)-encode input and output, supports highly configurable sorting,
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dynamic bibliography sets and many other features.")
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(license license:gpl3+)))
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(define-deprecated-package biber texlive-biber)
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(define-public rubber
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(package
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