gnu: Add r-alpsnmr.
* gnu/packages/bioconductor.scm (r-alpsnmr): New variable.
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@ -2619,6 +2619,59 @@ mapped reads). It is currently designed for un-stranded paired-end RNA-seq
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data.")
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data.")
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(license license:gpl2+)))
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(license license:gpl2+)))
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(define-public r-alpsnmr
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(package
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(name "r-alpsnmr")
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(version "4.0.2")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "AlpsNMR" version))
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(sha256
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(base32
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"1y4qqc6l8flv5ns4qwzjwmcykm6zcm4jg097mn8xyp7mnxymy7pl"))))
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(properties `((upstream-name . "AlpsNMR")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-baseline
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r-biocparallel
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r-dplyr
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r-fs
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r-future
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r-generics
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r-ggplot2
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r-glue
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r-htmltools
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r-magrittr
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r-matrixstats
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r-mixomics
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r-pcapp
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r-purrr
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r-readxl
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r-reshape2
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r-rlang
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r-rmarkdown
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r-scales
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r-signal
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r-speaq
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r-stringr
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r-tibble
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r-tidyr
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r-tidyselect
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r-vctrs))
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(native-inputs (list r-knitr))
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(home-page "https://sipss.github.io/AlpsNMR/")
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(synopsis "Automated spectral processing system for NMR")
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(description
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"This package reads Bruker @acronym{NMR, Nuclear Magnetic Resonance} data
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directories both zipped and unzipped. It provides automated and efficient
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signal processing for untargeted NMR metabolomics. It is able to interpolate
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the samples, detect outliers, exclude regions, normalize, detect peaks, align
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the spectra, integrate peaks, manage metadata and visualize the spectra.
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After spectra processing, it can apply multivariate analysis on extracted
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data. Efficient plotting with 1-D data is also available. Basic reading of
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1D ACD/Labs exported JDX samples is also available.")
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(license license:expat)))
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(define-public r-altcdfenvs
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(define-public r-altcdfenvs
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(package
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(package
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(name "r-altcdfenvs")
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(name "r-altcdfenvs")
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