gnu: Add r-deco.
* gnu/packages/bioconductor.scm (r-deco): New variable.
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@ -3178,6 +3178,48 @@ knowledge can achieve semi-supervised deconvolution of mixtures.")
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biological sequences.")
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(license license:gpl3)))
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(define-public r-deco
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(package
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(name "r-deco")
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(version "1.12.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "deco" version))
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(sha256
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(base32
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"18n5zgln33c79jbjzjlivs8ihyg8zci6minfqlvagxgzcpa67k0m"))))
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(properties `((upstream-name . "deco")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-ade4
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r-annotationdbi
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r-biobase
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r-biocparallel
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r-biocstyle
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r-cluster
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r-foreign
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r-gdata
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r-ggplot2
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r-gplots
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r-gridextra
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r-limma
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r-locfit
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r-made4
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r-rcolorbrewer
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r-reshape2
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r-scatterplot3d
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r-sfsmisc
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r-summarizedexperiment))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/fjcamlab/deco")
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(synopsis "Decomposing heterogeneous cohorts using omic data profiling")
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(description
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"This package discovers differential features in hetero- and homogeneous
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omic data by a two-step method including subsampling LIMMA and NSCA. DECO
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reveals feature associations to hidden subclasses not exclusively related to
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higher deregulation levels.")
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(license license:gpl3+)))
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(define-public r-deconvr
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(package
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(name "r-deconvr")
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