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gnu: samtools: Install libbam.a library. 

* gnu/packages/bioinformatics.scm (samtools)[arguments]: Add phase
  "install-library" to install the libbam.a library.
master
Ricardo Wurmus 2015-04-23 16:42:50 +02:00
parent 0a75450c14
commit 41dd712657
1 changed files with 7 additions and 3 deletions
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10
gnu/packages/bioinformatics.scm
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@ -1086,9 +1086,13 @@ distribution, coverage uniformity, strand specificity, etc.")
;; them.
(("(test_usage_subcommand\\(.*\\);)" cmd)
(string-append "unless ($subcommand eq 'stats') {" cmd "};")))))
(alist-delete
'configure
%standard-phases))))
(alist-cons-after
'install 'install-library
(lambda* (#:key outputs #:allow-other-keys)
(let ((lib (string-append (assoc-ref outputs "out") "/lib")))
(mkdir-p lib)
(copy-file "libbam.a" (string-append lib "/libbam.a"))))
(alist-delete 'configure %standard-phases)))))
(native-inputs `(("pkg-config" ,pkg-config)))
(inputs `(("ncurses" ,ncurses)
("perl" ,perl)