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gnu: Add r-bioassayr.

* gnu/packages/bioconductor.scm (r-bioassayr): New variable.
master
Ricardo Wurmus 2019-12-17 19:48:50 +01:00
parent 991554fc92
commit 48bcbef07a
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1 changed files with 33 additions and 0 deletions

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@ -6893,3 +6893,36 @@ libraries with a wide spectrum of algorithms. In addition, it offers
visualization functions for compound clustering results and chemical visualization functions for compound clustering results and chemical
structures.") structures.")
(license license:artistic2.0))) (license license:artistic2.0)))
(define-public r-bioassayr
(package
(name "r-bioassayr")
(version "1.24.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "bioassayR" version))
(sha256
(base32
"08vxkvxhqnryfbj4dwk3ifb9pn544www9zk2pj9fjbh5xfpwi7zw"))))
(properties `((upstream-name . "bioassayR")))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-chemminer" ,r-chemminer)
("r-dbi" ,r-dbi)
("r-matrix" ,r-matrix)
("r-rjson" ,r-rjson)
("r-rsqlite" ,r-rsqlite)
("r-xml" ,r-xml)))
(home-page "https://github.com/TylerBackman/bioassayR")
(synopsis "Cross-target analysis of small molecule bioactivity")
(description
"bioassayR is a computational tool that enables simultaneous analysis of
thousands of bioassay experiments performed over a diverse set of compounds
and biological targets. Unique features include support for large-scale
cross-target analyses of both public and custom bioassays, generation of
@dfn{high throughput screening fingerprints} (HTSFPs), and an optional
preloaded database that provides access to a substantial portion of publicly
available bioactivity data.")
(license license:artistic2.0)))