gnu: Add r-organism-dplyr.
* gnu/packages/bioconductor.scm (r-organism-dplyr): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
parent
090663a7a5
commit
4a6c6484df
|
@ -5062,6 +5062,45 @@ proteowizard library for mzML and mzIdentML. The netCDF reading code has
|
|||
previously been used in XCMS.")
|
||||
(license license:artistic2.0)))
|
||||
|
||||
(define-public r-organism-dplyr
|
||||
(package
|
||||
(name "r-organism-dplyr")
|
||||
(version "1.24.0")
|
||||
(source
|
||||
(origin
|
||||
(method url-fetch)
|
||||
(uri (bioconductor-uri "Organism.dplyr" version))
|
||||
(sha256
|
||||
(base32
|
||||
"0j29f85d66c45ww3417xx376vpz0mmvga5n7h2cl1sd4h70b55as"))))
|
||||
(properties `((upstream-name . "Organism.dplyr")))
|
||||
(build-system r-build-system)
|
||||
(propagated-inputs
|
||||
(list r-annotationdbi
|
||||
r-annotationfilter
|
||||
r-biocfilecache
|
||||
r-dbi
|
||||
r-dbplyr
|
||||
r-dplyr
|
||||
r-genomeinfodb
|
||||
r-genomicfeatures
|
||||
r-genomicranges
|
||||
r-iranges
|
||||
r-rlang
|
||||
r-rsqlite
|
||||
r-s4vectors
|
||||
r-tibble))
|
||||
(native-inputs (list r-knitr))
|
||||
(home-page "https://bioconductor.org/packages/Organism.dplyr")
|
||||
(synopsis "Dplyr-based access to Bioconductor annotation resources")
|
||||
(description
|
||||
"This package provides an alternative interface to Bioconductor @code{
|
||||
annotation} resources, in particular the gene identifier mapping functionality
|
||||
of the @code{org} packages (e.g., @code{org.Hs.eg.db}) and the genome coordinate
|
||||
functionality of the @code{TxDb} packages (e.g.,
|
||||
@code{TxDb.Hsapiens.UCSC.hg38.knownGene}).")
|
||||
(license license:artistic2.0)))
|
||||
|
||||
(define-public r-organismdbi
|
||||
(package
|
||||
(name "r-organismdbi")
|
||||
|
|
Reference in New Issue