me
/
guix
Archived
1
0
Fork 0

gnu: Add r-cistopic-next.

* gnu/packages/bioconductor.scm (r-cistopic-next): New variable.
master
Ricardo Wurmus 2021-06-29 12:28:19 +02:00
parent 05238ae30e
commit 4aa90cb4b3
No known key found for this signature in database
GPG Key ID: 197A5888235FACAC
1 changed files with 40 additions and 0 deletions

View File

@ -10249,6 +10249,46 @@ includes functionalities to identify cell states based on the contribution of
cisTopics and explore the nature and regulatory proteins driving them.") cisTopics and explore the nature and regulatory proteins driving them.")
(license license:gpl3))) (license license:gpl3)))
(define-public r-cistopic-next
(let ((commit "04cecbb9d1112fcc1a6edc28b5a506bcb49f2803")
(revision "1"))
(package
(inherit r-cistopic)
(name "r-cistopic-next")
;; The DESCRIPTION file says this is version 0.3.0, which is a bit odd
;; since the previous release is 2.1.0. Oh well.
(version (git-version "0.3.0" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/aertslab/cisTopic")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"11cg9szlysnsjiaahda4k5v2vh4rxx27zhz53hafgaq9mdz0kgi2"))))
(properties `((upstream-name . "cisTopic")))
(propagated-inputs
`(("r-aucell" ,r-aucell)
("r-data-table" ,r-data-table)
("r-dosnow" ,r-dosnow)
("r-dplyr" ,r-dplyr)
("r-dt" ,r-dt)
("r-feather" ,r-feather)
("r-fitdistrplus" ,r-fitdistrplus)
("r-genomicranges" ,r-genomicranges)
("r-ggplot2" ,r-ggplot2)
("r-lda" ,r-lda)
("r-matrix" ,r-matrix)
("r-plyr" ,r-plyr)
("r-rcistarget" ,r-rcistarget)
("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-text2vec" ,r-text2vec)))
(native-inputs
`(("r-knitr" ,r-knitr))))))
(define-public r-genie3 (define-public r-genie3
(package (package
(name "r-genie3") (name "r-genie3")