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gnu: Add genrich.

* gnu/packages/bioinformatics.scm (genrich): New variable.
master
Ricardo Wurmus 2019-03-06 13:28:45 +01:00
parent 1fe9a36173
commit 4fc9b5b1dd
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1 changed files with 32 additions and 0 deletions

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@ -13113,6 +13113,38 @@ descriptive settings file. The result is a set of comprehensive, interactive
HTML reports with interesting findings about your samples.") HTML reports with interesting findings about your samples.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public genrich
(package
(name "genrich")
(version "0.5")
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/jsh58/Genrich.git")
(commit (string-append "v" version))))
(sha256
(base32
"0x0q6z0208n3cxzqjla4rgjqpyqgwpmz27852lcvzkzaigymq4zp"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; there are none
#:phases
(modify-phases %standard-phases
(delete 'configure)
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
(install-file "Genrich" (string-append (assoc-ref outputs "out") "/bin"))
#t)))))
(inputs
`(("zlib" ,zlib)))
(home-page "https://github.com/jsh58/Genrich")
(synopsis "Detecting sites of genomic enrichment")
(description "Genrich is a peak-caller for genomic enrichment
assays (e.g. ChIP-seq, ATAC-seq). It analyzes alignment files generated
following the assay and produces a file detailing peaks of significant
enrichment.")
(license license:expat)))
(define-public mantis (define-public mantis
(let ((commit "4ffd171632c2cb0056a86d709dfd2bf21bc69b84") (let ((commit "4ffd171632c2cb0056a86d709dfd2bf21bc69b84")
(revision "1")) (revision "1"))