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gnu: r-structuralvariantannotation: Update to 1.8.2. 

* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.8.2.
[propagated-inputs]: Add r-genomeinfodb, r-iranges, r-s4vectors, and
r-summarizedexperiment.
Ricardo Wurmus 2021-08-24 00:33:18 +02:00
parent 1920e567a7
commit 514454cc8f
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1 changed files with 6 additions and 2 deletions
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gnu/packages/bioconductor.scm
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@ -4221,24 +4221,28 @@ graph construction.")
(define-public r-structuralvariantannotation (define-public r-structuralvariantannotation
(package (package
(name "r-structuralvariantannotation") (name "r-structuralvariantannotation")
(version "1.8.1") (version "1.8.2")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "StructuralVariantAnnotation" version)) (uri (bioconductor-uri "StructuralVariantAnnotation" version))
(sha256 (sha256
(base32 "13q6zbdkpx1iw6n75pggg50f9q3zb7k3dxjdra8mhi6zin7018j8")))) (base32 "04ac4mjh3pgdlws0aiacqg0vd7bhg890w44r7b90p947c3rk1mfw"))))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-assertthat" ,r-assertthat) `(("r-assertthat" ,r-assertthat)
("r-biocgenerics" ,r-biocgenerics) ("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings) ("r-biostrings" ,r-biostrings)
("r-dplyr" ,r-dplyr) ("r-dplyr" ,r-dplyr)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicfeatures" ,r-genomicfeatures) ("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges) ("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
("r-rlang" ,r-rlang) ("r-rlang" ,r-rlang)
("r-rtracklayer" ,r-rtracklayer) ("r-rtracklayer" ,r-rtracklayer)
("r-s4vectors" ,r-s4vectors)
("r-stringr" ,r-stringr) ("r-stringr" ,r-stringr)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-variantannotation" ,r-variantannotation))) ("r-variantannotation" ,r-variantannotation)))
(native-inputs (native-inputs
`(("r-knitr" ,r-knitr))) `(("r-knitr" ,r-knitr)))