me/guix
Archived
1
0
Fork 0
Code Activity

gnu: bpp-core: Update to 2.4.1.

Browse source 
* gnu/packages/bioinformatics.scm (bpp-core): Update to 2.4.1.

[source]: Remove the commit and use the release version. Changed to the github
stored sources.
[arguments]: Remove the disabled parallel-build.
[home-page]: Changed to new host Université Claude-Bernard Lyon 1.
This commit is contained in:
Mădălin Ionel Patrașcu 2023-04-21 10:16:36 +02:00 • committed by Ricardo Wurmus
parent 7cfc226d1e
commit 51ef858c94
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
1 changed files with 18 additions and 24 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

42
gnu/packages/bioinformatics.scm
View file

@ -2220,34 +2220,28 @@ easy-to-perform steps.")
(license license:gpl3+))) (license license:gpl3+)))
(define-public bpp-core (define-public bpp-core
;; The last release was in 2014 and the recommended way to install from source (package
;; is to clone the git repository, so we do this. (name "bpp-core")
;; http://biopp.univ-montp2.fr/wiki/index.php/Main_Page (version "2.4.1")
(let ((commit "7d8bced0d1a87291ea8dd7046b7fb5ff9c35c582")) (source
(package (origin
(name "bpp-core") (method git-fetch)
(version (string-append "2.2.0-1." (string-take commit 7))) (uri (git-reference
(source (origin (url "https://github.com/BioPP/bpp-core")
(method git-fetch) (commit (string-append "v" version))))
(uri (git-reference (file-name (git-file-name name version))
(url "http://biopp.univ-montp2.fr/git/bpp-core") (sha256
(commit commit))) (base32 "0ma2cl677l7s0n5sffh66cy9lxp5wycm50f121g8rx85p95vkgwv"))))
(file-name (string-append name "-" version "-checkout")) (build-system cmake-build-system)
(sha256 (home-page "https://pbil.univ-lyon1.fr/bpp-doc/bpp-core/html/index.html")
(base32 (synopsis "C++ libraries for Bioinformatics")
"10djsq5vlnkilv436gnmh4irpk49v29pa69r6xiryg32xmvn909j")))) (description
(build-system cmake-build-system) "Bio++ is a set of C++ libraries for Bioinformatics, including sequence
(arguments
`(#:parallel-build? #f))
(home-page "http://biopp.univ-montp2.fr")
(synopsis "C++ libraries for Bioinformatics")
(description
"Bio++ is a set of C++ libraries for Bioinformatics, including sequence
analysis, phylogenetics, molecular evolution and population genetics. It is analysis, phylogenetics, molecular evolution and population genetics. It is
Object Oriented and is designed to be both easy to use and computer efficient. Object Oriented and is designed to be both easy to use and computer efficient.
Bio++ intends to help programmers to write computer expensive programs, by Bio++ intends to help programmers to write computer expensive programs, by
providing them a set of re-usable tools.") providing them a set of re-usable tools.")
(license license:cecill-c)))) (license license:cecill-c)))
(define-public bpp-phyl (define-public bpp-phyl
;; The last release was in 2014 and the recommended way to install from source ;; The last release was in 2014 and the recommended way to install from source