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gnu: bpp-core: Update to 2.4.1.

* gnu/packages/bioinformatics.scm (bpp-core): Update to 2.4.1.

[source]: Remove the commit and use the release version. Changed to the github
stored sources.
[arguments]: Remove the disabled parallel-build.
[home-page]: Changed to new host Université Claude-Bernard Lyon 1.
master
Mădălin Ionel Patrașcu 2023-04-21 10:16:36 +02:00 committed by Ricardo Wurmus
parent 7cfc226d1e
commit 51ef858c94
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GPG Key ID: 197A5888235FACAC
1 changed files with 18 additions and 24 deletions

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@ -2220,34 +2220,28 @@ easy-to-perform steps.")
(license license:gpl3+)))
(define-public bpp-core
;; The last release was in 2014 and the recommended way to install from source
;; is to clone the git repository, so we do this.
;; http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
(let ((commit "7d8bced0d1a87291ea8dd7046b7fb5ff9c35c582"))
(package
(name "bpp-core")
(version (string-append "2.2.0-1." (string-take commit 7)))
(source (origin
(method git-fetch)
(uri (git-reference
(url "http://biopp.univ-montp2.fr/git/bpp-core")
(commit commit)))
(file-name (string-append name "-" version "-checkout"))
(sha256
(base32
"10djsq5vlnkilv436gnmh4irpk49v29pa69r6xiryg32xmvn909j"))))
(build-system cmake-build-system)
(arguments
`(#:parallel-build? #f))
(home-page "http://biopp.univ-montp2.fr")
(synopsis "C++ libraries for Bioinformatics")
(description
"Bio++ is a set of C++ libraries for Bioinformatics, including sequence
(package
(name "bpp-core")
(version "2.4.1")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/BioPP/bpp-core")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
(base32 "0ma2cl677l7s0n5sffh66cy9lxp5wycm50f121g8rx85p95vkgwv"))))
(build-system cmake-build-system)
(home-page "https://pbil.univ-lyon1.fr/bpp-doc/bpp-core/html/index.html")
(synopsis "C++ libraries for Bioinformatics")
(description
"Bio++ is a set of C++ libraries for Bioinformatics, including sequence
analysis, phylogenetics, molecular evolution and population genetics. It is
Object Oriented and is designed to be both easy to use and computer efficient.
Bio++ intends to help programmers to write computer expensive programs, by
providing them a set of re-usable tools.")
(license license:cecill-c))))
(license license:cecill-c)))
(define-public bpp-phyl
;; The last release was in 2014 and the recommended way to install from source