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gnu: Add r-dearseq.

* gnu/packages/bioconductor.scm (r-dearseq): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
master
Marcel Schilling 2021-12-13 09:49:23 +01:00 committed by Ricardo Wurmus
parent efd4d36a28
commit 531a69ecb6
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1 changed files with 30 additions and 0 deletions

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@ -1518,6 +1518,36 @@ data. In addition, provides numerous plotting functions for commonly
used visualizations.")
(license license:artistic2.0)))
(define-public r-dearseq
(package
(name "r-dearseq")
(version "1.6.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "dearseq" version))
(sha256
(base32
"07vr27rv3z86ajd62c0ilvfgz9z35qsiwwi5pv4sygbhnnjwh3rc"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
("r-kernsmooth" ,r-kernsmooth)
("r-matrixstats" ,r-matrixstats)
("r-patchwork" ,r-patchwork)
("r-pbapply" ,r-pbapply)
("r-statmod" ,r-statmod)
("r-survey" ,r-survey)
("r-viridislite" ,r-kernsmooth)))
(home-page "https://github.com/borishejblum/dearseq")
(synopsis "DEA for RNA-seq data through a robust variance component test")
(description
"This is a package for Differential Expression Analysis of RNA-seq data.
It features a variance component score test accounting for data
heteroscedasticity through precision weights. Perform both gene-wise and gene
set analyses, and can deal with repeated or longitudinal data.")
(license license:gpl2)))
(define-public r-decipher
(package
(name "r-decipher")