gnu: r-rhdf5: Update to 2.34.0.
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.34.0. [propagated-inputs]: Add r-rhdf5filters. [arguments]: Avoid to have a plain directory on the list of libraries to link. Co-authored-by: Ricardo Wurmus <reka@elephly.net>.master
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@ -9105,16 +9105,28 @@ HDF5 datasets.")
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(define-public r-rhdf5
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(package
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(name "r-rhdf5")
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(version "2.32.3")
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(version "2.34.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "rhdf5" version))
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(sha256
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(base32
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"0fnx60dpf6s2qwq48lg98g18g8k7wgm66pw0kamlbb7l2hnwycvf"))))
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"0almr1vscrgj5g4dyrags131wia2pmdbdidlpskbgm44ha6hpmqi"))))
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(build-system r-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(add-after 'unpack 'fix-linking
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(lambda _
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(substitute* "src/Makevars"
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;; This is to avoid having a plain directory on the list of
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;; libraries to link.
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(("\\(RHDF5_LIBS\\)" match)
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(string-append match "/libhdf5.a")))
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#t)))))
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(propagated-inputs
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`(("r-rhdf5lib" ,r-rhdf5lib)))
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`(("r-rhdf5filters" ,r-rhdf5filters)
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("r-rhdf5lib" ,r-rhdf5lib)))
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(inputs
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`(("zlib" ,zlib)))
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(native-inputs
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