gnu: r-rhdf5: Update to 2.34.0.
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.34.0. [propagated-inputs]: Add r-rhdf5filters. [arguments]: Avoid to have a plain directory on the list of libraries to link. Co-authored-by: Ricardo Wurmus <reka@elephly.net>.master
parent
86fcceeae1
commit
53affb349a
|
@ -9105,16 +9105,28 @@ HDF5 datasets.")
|
||||||
(define-public r-rhdf5
|
(define-public r-rhdf5
|
||||||
(package
|
(package
|
||||||
(name "r-rhdf5")
|
(name "r-rhdf5")
|
||||||
(version "2.32.3")
|
(version "2.34.0")
|
||||||
(source (origin
|
(source (origin
|
||||||
(method url-fetch)
|
(method url-fetch)
|
||||||
(uri (bioconductor-uri "rhdf5" version))
|
(uri (bioconductor-uri "rhdf5" version))
|
||||||
(sha256
|
(sha256
|
||||||
(base32
|
(base32
|
||||||
"0fnx60dpf6s2qwq48lg98g18g8k7wgm66pw0kamlbb7l2hnwycvf"))))
|
"0almr1vscrgj5g4dyrags131wia2pmdbdidlpskbgm44ha6hpmqi"))))
|
||||||
(build-system r-build-system)
|
(build-system r-build-system)
|
||||||
|
(arguments
|
||||||
|
`(#:phases
|
||||||
|
(modify-phases %standard-phases
|
||||||
|
(add-after 'unpack 'fix-linking
|
||||||
|
(lambda _
|
||||||
|
(substitute* "src/Makevars"
|
||||||
|
;; This is to avoid having a plain directory on the list of
|
||||||
|
;; libraries to link.
|
||||||
|
(("\\(RHDF5_LIBS\\)" match)
|
||||||
|
(string-append match "/libhdf5.a")))
|
||||||
|
#t)))))
|
||||||
(propagated-inputs
|
(propagated-inputs
|
||||||
`(("r-rhdf5lib" ,r-rhdf5lib)))
|
`(("r-rhdf5filters" ,r-rhdf5filters)
|
||||||
|
("r-rhdf5lib" ,r-rhdf5lib)))
|
||||||
(inputs
|
(inputs
|
||||||
`(("zlib" ,zlib)))
|
`(("zlib" ,zlib)))
|
||||||
(native-inputs
|
(native-inputs
|
||||||
|
|
Reference in New Issue