gnu: python-numpy: Update to 1.26.0.
* gnu/packages/python-xyz.scm (python-numpy): Update to 1.26.0. [build-system]: Use pyproject-build-system. [arguments]: Move test flags to #:test-flags; add phase 'use-setuptools-backend. [native-inputs]: Remove gfortran; add replace python-cython with python-cython-3; add meson/newer and ninja. Change-Id: I783bbca58624bf6f047056ba21d838f5ecb09ac2
This commit is contained in:
Ricardo Wurmus
parent
2a7e513803
commit
5450886934
1 changed files with 53 additions and 42 deletions
|
|
@ -8240,7 +8240,7 @@ writing C extensions for Python as easy as Python itself.")
|
|||
(define-public python-numpy
|
||||
(package
|
||||
(name "python-numpy")
|
||||
(version "1.23.2")
|
||||
(version "1.26.0")
|
||||
(source
|
||||
(origin
|
||||
(method url-fetch)
|
||||
|
|
@ -8249,15 +8249,52 @@ writing C extensions for Python as easy as Python itself.")
|
|||
version "/numpy-" version ".tar.gz"))
|
||||
(sha256
|
||||
(base32
|
||||
"00bx3idjwhmzkdawg2dx1bp0316ig37jfx0dm82bvyv1hbj013dp"))))
|
||||
(build-system python-build-system)
|
||||
"1pvz1qcz7pvc13fsisfiz9lk35bk3jglkdnnp3iay5dzx27wfgzr"))))
|
||||
(build-system pyproject-build-system)
|
||||
(arguments
|
||||
(list
|
||||
#:test-flags
|
||||
#~(list "-k" (string-append
|
||||
;; These tests may fail on 32-bit systems (see:
|
||||
;; https://github.com/numpy/numpy/issues/18387).
|
||||
"not test_float_remainder_overflow "
|
||||
"and not test_pareto "
|
||||
;; The 'test_rint_big_int' test fails on older
|
||||
;; x86_64 CPUs such as the Core 2 Duo (see:
|
||||
;; https://github.com/numpy/numpy/issues/22170).
|
||||
"and not test_rint_big_int "
|
||||
;; The huge_array test is too large for 32-bit (see:
|
||||
;; https://bugs.gentoo.org/843599 and
|
||||
;; https://bugs.gentoo.org/846548).
|
||||
;; TestKind.test_all is a Fortran type failure
|
||||
;; that may be toolchain or environment related.
|
||||
#$@(if (or (target-x86?) (target-arm32?))
|
||||
`(" and not test_identityless_reduction_huge_array"
|
||||
" and not (TestKind and test_all)")
|
||||
'())
|
||||
;; This test fails when building from aarch64-linux.
|
||||
#$@(if (target-arm32?)
|
||||
`(" and not test_features")
|
||||
'())
|
||||
;; These tests seem to fail on machines without
|
||||
;; an FPU is still under investigation upstream.
|
||||
;; https://github.com/numpy/numpy/issues/20635
|
||||
#$@(if (target-riscv64?)
|
||||
`(" and not test_float"
|
||||
" and not test_fpclass")
|
||||
'())))
|
||||
#:modules '((guix build utils)
|
||||
(guix build python-build-system)
|
||||
(guix build pyproject-build-system)
|
||||
(ice-9 format))
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
;; The meson build backend requires a bundled modified version of
|
||||
;; meson.
|
||||
(add-after 'unpack 'use-setuptools-backend
|
||||
(lambda _
|
||||
(delete-file "pyproject.toml")
|
||||
(rename-file "pyproject.toml.setuppy" "pyproject.toml")))
|
||||
(add-before 'build 'parallelize-build
|
||||
(lambda _
|
||||
(setenv "NPY_NUM_BUILD_JOBS"
|
||||
|
|
@ -8286,50 +8323,24 @@ include_dirs = ~:*~a/include~%"
|
|||
(substitute* "numpy/core/tests/test_cpu_features.py"
|
||||
(("/bin/true") (search-input-file inputs "bin/true")))))
|
||||
(replace 'check
|
||||
(lambda* (#:key tests? outputs inputs #:allow-other-keys)
|
||||
(lambda* (#:key tests? test-flags #:allow-other-keys)
|
||||
(when tests?
|
||||
(invoke "./runtests.py" "-vv" "--no-build" "--mode=fast"
|
||||
"-j" (number->string (parallel-job-count))
|
||||
;; Contrary to scipy, the runtests.py script of numpy
|
||||
;; does *not* automatically provide -n when -j is used
|
||||
;; (see: https://github.com/numpy/numpy/issues/21359).
|
||||
"--" "-n" (number->string (parallel-job-count))
|
||||
"-k" (string-append
|
||||
;; These tests may fail on 32-bit systems (see:
|
||||
;; https://github.com/numpy/numpy/issues/18387).
|
||||
"not test_float_remainder_overflow "
|
||||
"and not test_pareto "
|
||||
;; The 'test_rint_big_int' test fails on older
|
||||
;; x86_64 CPUs such as the Core 2 Duo (see:
|
||||
;; https://github.com/numpy/numpy/issues/22170).
|
||||
"and not test_rint_big_int "
|
||||
;; The huge_array test is too large for 32-bit (see:
|
||||
;; https://bugs.gentoo.org/843599 and
|
||||
;; https://bugs.gentoo.org/846548).
|
||||
;; TestKind.test_all is a Fortran type failure
|
||||
;; that may be toolchain or environment related.
|
||||
#$@(if (or (target-x86?) (target-arm32?))
|
||||
`(" and not test_identityless_reduction_huge_array"
|
||||
" and not (TestKind and test_all)")
|
||||
'())
|
||||
;; This test fails when building from aarch64-linux.
|
||||
#$@(if (target-arm32?)
|
||||
`(" and not test_features")
|
||||
'())
|
||||
;; These tests seem to fail on machines without
|
||||
;; an FPU is still under investigation upstream.
|
||||
;; https://github.com/numpy/numpy/issues/20635
|
||||
#$@(if (target-riscv64?)
|
||||
`(" and not test_float"
|
||||
" and not test_fpclass")
|
||||
'())))))))))
|
||||
(apply invoke "./runtests.py" "-vv" "--no-build" "--mode=fast"
|
||||
"-j" (number->string (parallel-job-count))
|
||||
;; Contrary to scipy, the runtests.py script of numpy
|
||||
;; does *not* automatically provide -n when -j is used
|
||||
;; (see: https://github.com/numpy/numpy/issues/21359).
|
||||
"--" "-n" (number->string (parallel-job-count))
|
||||
test-flags)))))))
|
||||
(native-inputs
|
||||
(list python-cython
|
||||
(list ;; The presence of the optional gfortran causes the build to fail.
|
||||
;;gfortran
|
||||
meson/newer ninja
|
||||
python-cython-3
|
||||
python-hypothesis
|
||||
python-pytest
|
||||
python-pytest-xdist
|
||||
python-typing-extensions
|
||||
gfortran))
|
||||
python-typing-extensions))
|
||||
(inputs (list bash openblas))
|
||||
(home-page "https://numpy.org")
|
||||
(synopsis "Fundamental package for scientific computing with Python")
|
||||
|
|
|
|||
Reference in a new issue