gnu: Add r-slingshot.
* gnu/packages/bioconductor.scm (r-slingshot): New variable.
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		|  | @ -2600,6 +2600,37 @@ purposes.  The package also contains legacy support for early single-end, | |||
| ungapped alignment formats.") | ||||
|     (license license:artistic2.0))) | ||||
| 
 | ||||
| (define-public r-slingshot | ||||
|   (package | ||||
|    (name "r-slingshot") | ||||
|    (version "1.8.0") | ||||
|    (source (origin | ||||
|             (method url-fetch) | ||||
|             (uri (bioconductor-uri "slingshot" version)) | ||||
|             (sha256 | ||||
|              (base32 | ||||
|               "0sz4frlk7c1g8adyfcgi1mf1xsf9n5zib4bw7j9kl711dbhvkqwl")))) | ||||
|    (build-system r-build-system) | ||||
|    (propagated-inputs | ||||
|     `(("r-ape" ,r-ape) | ||||
|       ("r-igraph" ,r-igraph) | ||||
|       ("r-matrixstats" ,r-matrixstats) | ||||
|       ("r-princurve" ,r-princurve) | ||||
|       ("r-singlecellexperiment" ,r-singlecellexperiment) | ||||
|       ("r-summarizedexperiment" ,r-summarizedexperiment))) | ||||
|    (native-inputs | ||||
|     `(("r-knitr" ,r-knitr))) | ||||
|    (home-page "https://bioconductor.org/packages/slingshot") | ||||
|    (synopsis "Tools for ordering single-cell sequencing") | ||||
|    (description "This package provides functions for inferring continuous, | ||||
| branching lineage structures in low-dimensional data.  Slingshot was designed | ||||
| to model developmental trajectories in single-cell RNA sequencing data and | ||||
| serve as a component in an analysis pipeline after dimensionality reduction | ||||
| and clustering.  It is flexible enough to handle arbitrarily many branching | ||||
| events and allows for the incorporation of prior knowledge through supervised | ||||
| graph construction.") | ||||
|    (license license:artistic2.0))) | ||||
| 
 | ||||
| (define-public r-structuralvariantannotation | ||||
|   (package | ||||
|     (name "r-structuralvariantannotation") | ||||
|  |  | |||
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