gnu: python-cooler: Use more recent cytoolz.
* gnu/packages/bioinformatics.scm (python-cooler)[propagated-inputs]: Replace python-cytoolz-for-cooler with python-cytoolz.
parent
9dafaf1635
commit
5caad9f252
|
@ -12652,6 +12652,13 @@ fasta subsequences.")
|
|||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
;; cooler requests cytoolz<0.11. It only uses cytoolz for "compose",
|
||||
;; which composes two functions.
|
||||
(add-after 'unpack 'use-recent-cytoolz
|
||||
(lambda _
|
||||
(substitute* '("requirements.txt"
|
||||
"cooler.egg-info/requires.txt")
|
||||
(("cytoolz.*<.*0.11") "cytoolz"))))
|
||||
(add-after 'unpack 'patch-tests
|
||||
(lambda _
|
||||
(substitute* "tests/test_create.py"
|
||||
|
@ -12677,7 +12684,7 @@ fasta subsequences.")
|
|||
(list python-asciitree
|
||||
python-biopython
|
||||
python-click
|
||||
python-cytoolz-for-cooler
|
||||
python-cytoolz
|
||||
python-dask
|
||||
python-h5py
|
||||
python-multiprocess
|
||||
|
|
Reference in New Issue