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gnu: r-rtracklayer: Update to 1.52.0.

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* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.52.0.
[propagated-inputs]: Add r-biocio and r-restfulr.
This commit is contained in:
Ricardo Wurmus 2021-06-05 08:49:48 +02:00
parent e22d743aa6
commit 5ce21e7153
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GPG key ID: 197A5888235FACAC
1 changed files with 5 additions and 4 deletions

9
gnu/packages/bioconductor.scm
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@ -3986,13 +3986,13 @@ tab-delimited (tabix) files.")
(define-public r-rtracklayer (define-public r-rtracklayer
(package (package
(name "r-rtracklayer") (name "r-rtracklayer")
(version "1.50.0") (version "1.52.0")
(source (origin (source (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "rtracklayer" version)) (uri (bioconductor-uri "rtracklayer" version))
(sha256 (sha256
(base32 (base32
"12zimhpdzjyzd81wrzz5hdbzvlgzcs22x1nnaf2jq4cba3ch5px8")))) "0iic0g0clsjd9ypdmfs6k52hrnmfszhxzg0xx89nszpasf69wghv"))))
(build-system r-build-system) (build-system r-build-system)
(arguments (arguments
`(#:phases `(#:phases
@ -4002,20 +4002,21 @@ tab-delimited (tabix) files.")
(substitute* "DESCRIPTION" (substitute* "DESCRIPTION"
((" zlibbioc,") "")) ((" zlibbioc,") ""))
(substitute* "NAMESPACE" (substitute* "NAMESPACE"
(("import\\(zlibbioc\\)") "")) (("import\\(zlibbioc\\)") "")))))))
#t)))))
(native-inputs (native-inputs
`(("pkg-config" ,pkg-config))) `(("pkg-config" ,pkg-config)))
(inputs (inputs
`(("zlib" ,zlib))) `(("zlib" ,zlib)))
(propagated-inputs (propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics) `(("r-biocgenerics" ,r-biocgenerics)
("r-biocio" ,r-biocio)
("r-biostrings" ,r-biostrings) ("r-biostrings" ,r-biostrings)
("r-genomeinfodb" ,r-genomeinfodb) ("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments) ("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges) ("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges) ("r-iranges" ,r-iranges)
("r-rcurl" ,r-rcurl) ("r-rcurl" ,r-rcurl)
("r-restfulr" ,r-restfulr)
("r-rsamtools" ,r-rsamtools) ("r-rsamtools" ,r-rsamtools)
("r-s4vectors" ,r-s4vectors) ("r-s4vectors" ,r-s4vectors)
("r-xml" ,r-xml) ("r-xml" ,r-xml)