gnu: Add r-castor.
* gnu/packages/cran.scm (r-castor): New variable.
This commit is contained in:
parent
dbf965dd7b
commit
5ebbedea58
1 changed files with 28 additions and 1 deletions
|
@ -35,7 +35,7 @@
|
||||||
;;; Copyright © 2020 Aniket Patil <aniket112.patil@gmail.com>
|
;;; Copyright © 2020 Aniket Patil <aniket112.patil@gmail.com>
|
||||||
;;; Copyright © 2021 Marcel Schilling <marcel.schilling@uni-luebeck.de>
|
;;; Copyright © 2021 Marcel Schilling <marcel.schilling@uni-luebeck.de>
|
||||||
;;; Copyright © 2021 Guillaume Le Vaillant <glv@posteo.net>
|
;;; Copyright © 2021 Guillaume Le Vaillant <glv@posteo.net>
|
||||||
;;; Copyright © 2022 Navid Afkhami <navid.afkhami@mdc-berlin.de>
|
;;; Copyright © 2022, 2023 Navid Afkhami <navid.afkhami@mdc-berlin.de>
|
||||||
;;; Copyright © 2022 Greg Hogan <code@greghogan.com>
|
;;; Copyright © 2022 Greg Hogan <code@greghogan.com>
|
||||||
;;;
|
;;;
|
||||||
;;; This file is part of GNU Guix.
|
;;; This file is part of GNU Guix.
|
||||||
|
@ -256,6 +256,33 @@ can limit either their total size or the age of the oldest object (or both),
|
||||||
automatically pruning objects to maintain the constraints.")
|
automatically pruning objects to maintain the constraints.")
|
||||||
(license license:expat)))
|
(license license:expat)))
|
||||||
|
|
||||||
|
(define-public r-castor
|
||||||
|
(package
|
||||||
|
(name "r-castor")
|
||||||
|
(version "1.7.6")
|
||||||
|
(source (origin
|
||||||
|
(method url-fetch)
|
||||||
|
(uri (cran-uri "castor" version))
|
||||||
|
(sha256
|
||||||
|
(base32
|
||||||
|
"1qbndwmzzpkzgiah0hgid9z5f9iv2j53d515bjcci1591gx1fk36"))))
|
||||||
|
(properties `((upstream-name . "castor")))
|
||||||
|
(build-system r-build-system)
|
||||||
|
(propagated-inputs (list r-matrix r-naturalsort r-rcpp r-rspectra))
|
||||||
|
(home-page "https://cran.r-project.org/package=castor")
|
||||||
|
(synopsis "Efficient phylogenetics on large trees")
|
||||||
|
(description
|
||||||
|
"This tool supports analyses on massive phylogenies comprising up to
|
||||||
|
millions of tips. Functions include pruning, rerooting, calculation of
|
||||||
|
most-recent common ancestors, calculating distances from the tree root and
|
||||||
|
calculating pairwise distances. In addition, this tool takes care of
|
||||||
|
calculation of phylogenetic signal and mean trait depth (trait conservatism),
|
||||||
|
ancestral state reconstruction and hidden character prediction of discrete
|
||||||
|
characters, simulating and fitting models of trait evolution, fitting and
|
||||||
|
simulating diversification models, dating trees, comparing trees, and
|
||||||
|
reading/writing trees in Newick format.")
|
||||||
|
(license license:gpl2+)))
|
||||||
|
|
||||||
(define-public r-collections
|
(define-public r-collections
|
||||||
(package
|
(package
|
||||||
(name "r-collections")
|
(name "r-collections")
|
||||||
|
|
Reference in a new issue