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@ -13733,6 +13733,39 @@ BAM files. With this package, you can build base-pair coverage matrices for
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regions or annotations of your choice from BigWig files.")
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regions or annotations of your choice from BigWig files.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-beclear
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(package
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(name "r-beclear")
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(version "2.8.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "BEclear" version))
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(sha256
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(base32
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"0w18livng2gcmjgvws7pix3gsnj237rs34sgwxsfmn8p5vfx8b30"))))
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(properties `((upstream-name . "BEclear")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-abind" ,r-abind)
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("r-biocparallel" ,r-biocparallel)
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("r-data-table" ,r-data-table)
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("r-futile-logger" ,r-futile-logger)
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("r-matrix" ,r-matrix)
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("r-outliers" ,r-outliers)
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("r-rcpp" ,r-rcpp)
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("r-rdpack" ,r-rdpack)))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "https://github.com/uds-helms/BEclear")
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(synopsis "Correction of batch effects in DNA methylation data")
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(description
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"This package provides functions to detect and correct for batch effects
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in DNA methylation data. The core function is based on latent factor models
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and can also be used to predict missing values in any other matrix containing
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real numbers.")
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(license license:gpl3)))
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(define-public r-tximeta
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(define-public r-tximeta
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(package
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(package
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(name "r-tximeta")
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(name "r-tximeta")
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