gnu: julia-xyz: Adjust style using G-expressions.
* gnu/packages/julia-xyz.scm: Adjust style using G-expressions. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
parent
a53f4b6f16
commit
637e677140
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@ -139,7 +139,7 @@ ANSI escape codes to another format.")
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(base32 "1g0kyzcdykgs247j72jpc2qqall696jwgb3hnn4cxmbi8bkf7wpk"))))
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(build-system julia-build-system)
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(arguments
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`(#:parallel-tests? #f))
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(list #:parallel-tests? #f))
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(home-page "https://github.com/JuliaTesting/Aqua.jl")
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(synopsis "Automated quality assurance for Julia packages")
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(description "@acronym{Aqua.jl, Auto QUality Assurance for Julia packages},
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@ -165,7 +165,7 @@ provides functions to run a few automatable checks for Julia packages.")
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;; Expression: @inferred(ArrayInterface.size(Rnr)) === (StaticInt(4),)
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;; Evaluated: (static(2),) === (static(4),)
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;; Disable as stopgap.
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`(#:tests? ,(not (target-x86-32?))))
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(list #:tests? (not (target-x86-32?))))
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(propagated-inputs
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(list julia-ifelse
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julia-requires
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@ -335,9 +335,10 @@ the entries on the bands.")
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(base32 "1xz3kdrphp4b158pg7dwkiry49phs2fjjpdvk1hjpww5ykxacks8"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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,@(if (target-x86-32?)
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'((modify-phases %standard-phases
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(list
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#:phases
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(if (target-x86-32?)
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#~(modify-phases %standard-phases
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(add-after 'unpack 'remove-failing-tests-i686
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(lambda _
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(substitute* "test/GroupsTests.jl"
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@ -351,8 +352,8 @@ the entries on the bands.")
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(substitute* "test/ExecutionTests.jl"
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;; Evaluated: 12 == 8
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(("@test @ballocated\\(Ref\\(1\\)\\)")
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"@test_broken @ballocated(Ref(1))"))))))
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'(%standard-phases))))
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"@test_broken @ballocated(Ref(1))")))))
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#~%standard-phases)))
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(propagated-inputs
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(list julia-json))
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(home-page "https://github.com/JuliaCI/BenchmarkTools.jl")
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@ -405,8 +406,9 @@ only, not performance experiments.")
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(base32 "1wf6qgsada59r2fykxfj9hcr635wl8maqxbd3w8qpa01k9glxa0k"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'skip-test
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(lambda _
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;; Test fails because an unexpected type representation from
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@ -498,8 +500,9 @@ sequences.")
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(base32 "1222rwdndi777lai8a6dwrh35i5rgmj75kcrhn8si72sxgz0syjm"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'adjust-tests
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(lambda _
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(substitute* "test/runtests.jl"
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@ -528,14 +531,15 @@ and amino acids that are used ny otherBioJulia packages.")
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(base32 "1by26036fk9mawmcgqxpwizgbs398v9p6vrbsgg7h6llqn3q9iw1"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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,@(if (target-64bit?)
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'(%standard-phases)
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'((modify-phases %standard-phases
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(list
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#:phases
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(if (target-64bit?)
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#~%standard-phases
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#~(modify-phases %standard-phases
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(add-after 'unpack 'fix-tests-int32-i686
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(lambda _
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(substitute* "test/test_blockarrays.jl"
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(("Int64") "Int32")))))))))
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(("Int64") "Int32"))))))))
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(propagated-inputs
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(list julia-arraylayouts
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julia-fillarrays))
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@ -627,7 +631,8 @@ structures.")
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;; freeze, see
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;; https://travis-ci.org/BioJulia/BufferedStreams.jl/jobs/491050182
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(arguments
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'(#:tests? #f
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(list
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#:tests? #f
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#:julia-package-name "BufferedStreams"
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#:julia-package-uuid "e1450e63-4bb3-523b-b2a4-4ffa8c0fd77d"))
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(propagated-inputs
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@ -815,8 +820,9 @@ dependencies, while keeping @code{ChainRulesCore.jl} as light-weight as possible
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(base32 "0xm603nylkwk4bzx66zv1g3syzrvn3jh9spdx7kvcvgszzyrrgh4"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-before 'reset-gzip-timestamps 'make-files-writable
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(lambda* (#:key outputs #:allow-other-keys)
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(let ((out (assoc-ref outputs "out")))
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@ -1015,8 +1021,9 @@ way.")
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(base32 "1b23p0zk8dx2sf01cnw177mqci7qd81b9s32ixz9clsh0r0icl1b"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'fix-tests
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(lambda _
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(substitute* "test/runtests.jl"
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@ -1030,7 +1037,7 @@ way.")
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(substitute* "Project.toml"
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(("55351af7-c7e9-48d6-89ff-24e801d99491")
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"6b7a57c9-7cc1-4fdf-b7f5-e857abae3636"))))
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,@(if (target-64bit?)
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#$@(if (target-64bit?)
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'()
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'((add-after 'unpack 'fix-tests-int32-i686
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(lambda _
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@ -1160,8 +1167,9 @@ dependency on it.")
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(base32 "1bk0amrghgjrkyn1mm4ac23swwbgszl1d0qyl9137qj5zvv9dasp"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'skip-failing-test
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(lambda _
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;; Tests with non-standard colors.
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@ -1220,9 +1228,10 @@ Julia from R or Python.")
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julia-orderedcollections))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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,@(if (target-x86-32?)
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'((modify-phases %standard-phases
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(list
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#:phases
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(if (target-x86-32?)
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#~(modify-phases %standard-phases
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(add-after 'unpack 'remove-failing-test-i686
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(lambda _
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;; The evaluation returns the correct value,
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@ -1230,8 +1239,8 @@ Julia from R or Python.")
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;; but, for some reasons, is considered as failed.
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(substitute* "test/test_accumulator.jl"
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(("@test sprint\\(show,Accumulator\\(1 => 3, 3 => 4\\)\\)")
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"@test_broken sprint(show, Accumulator(1 => 3, 3 => 4))"))))))
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'(%standard-phases))))
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"@test_broken sprint(show, Accumulator(1 => 3, 3 => 4))")))))
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#~%standard-phases)))
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(home-page "https://github.com/JuliaCollections/DataStructures.jl")
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(synopsis "Julia module providing different data structures")
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(description "This package implements a variety of data structures,
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@ -1275,9 +1284,10 @@ without having to take direct dependencies.")
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(base32 "15j3hrqq6nazn533bfsvg32xznacbzsl303j1qs48av59ppnvhhv"))))
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(build-system julia-build-system)
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(arguments
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`(#:tests? #f ; Tests need upgrading with newer Julia version.
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(list
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#:tests? #f ; Tests need upgrading with newer Julia version.
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#:phases
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(modify-phases %standard-phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'skip-known-failing-tests
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(lambda _
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;; See upstream report:
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@ -1354,8 +1364,9 @@ dictionaries in Julia, for improved productivity and performance.")
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(base32 "1yqd9wg4z15k42mrp4y14j2x0sq7yrjhm5zpqklrw6w6j1c367ig"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'skip-flakey-tests
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(lambda _
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;; Some combination of these tests fail nondeterministically
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@ -1393,7 +1404,7 @@ straightforward loop implementation.")
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(base32 "0fy4kfnfacyfmlly6nqxn77dk2gqw80b69zb4m1i0i39zv3cpqfb"))))
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(build-system julia-build-system)
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(arguments
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`(#:tests? #f)) ; Tests try to read SSL certificates.
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(list #:tests? #f)) ; Tests try to read SSL certificates.
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(home-page "https://juliadocs.github.io/DocStringExtensions.jl/latest/")
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(synopsis "Extensions for Julia's docsystem")
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(description "This package provides a collection of useful extensions for
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@ -1420,8 +1431,9 @@ valuable enough at this time.")
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(base32 "00ai3c24i3fkn5plmavampcxm0ijhwk0v5cn9xwm7rvbjnnvaaam"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'patch-source
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(lambda* (#:key inputs #:allow-other-keys)
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(substitute* "src/Deps.jl"
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@ -1505,7 +1517,7 @@ valuable enough at this time.")
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(base32 "05p57p8xlkn42m1lv9gq4hl96vp7hpj19d51p828ai1rbpcpi3a6"))))
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(build-system julia-build-system)
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(arguments
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`(#:tests? #f)) ; Tests require network.
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(list #:tests? #f)) ; Tests require network.
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(inputs
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;; We don't want to propagate the bootstrap version.
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;; Cycle with Documenter.jl in later versions.
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@ -1604,8 +1616,9 @@ stressing the robustness of differentiation tools.")
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(base32 "05vr5wbzqpchnb96b3pmn67x196mbfnkv7r9bdlz3gm56if4awk5"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'adjust-test-suite
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(lambda _
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(substitute* "test/runtests.jl"
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@ -1638,8 +1651,9 @@ combinations of dual numbers with predefined Julia numeric types.")
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(base32 "0py46kxl702r8pw3v7x4cqllf7yc91b0dr7vb60xh2qi7d6y3jc7"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'adjust-test-suite
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(lambda _
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(substitute* "test/runtests.jl"
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@ -1690,8 +1704,9 @@ before (or after)\".")
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(base32 "0h8aaynqlxrkn8575k5vqmhzil4vvxchhf0bcxa6zwawp558gj2y"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'skip-network-tests
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(lambda _
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(substitute* "test/runtests.jl"
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@ -1768,8 +1783,9 @@ need the ffmpeg binaries + executables, and don't want the overhead of
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(base32 "1b18x43i737g5q41n9818xbnc2pgd98q1m6yw3h29yri0clg4gfx"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(delete 'reset-gzip-timestamps)
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(add-after 'link-depot 'skip-network-tests
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(lambda _
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@ -1818,7 +1834,7 @@ high-level support for formatted files (in contrast with Julia's low-level
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(base32 "136wm4ik6isrdanmpi4gdr1qw0qhr15i925qzjxbawk5hnyzwng9"))))
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(build-system julia-build-system)
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(arguments
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`(#:tests? #f)) ; Cycle with JLSO.jl
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(list #:tests? #f)) ; Cycle with JLSO.jl
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(home-page "https://github.com/rofinn/FilePathsBase.jl")
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(synopsis "Filesystem path types in Julia")
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(description "@code{FilePathsBase.jl} provides a type based approach to
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@ -1864,8 +1880,9 @@ following types: @code{Eye}, @code{Fill}, @code{Ones}, @code{Zeros},
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(base32 "105f6r0hq97n9mxf1nacmz94dpca66vzqj5p3zh4h0brshmggqnq"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-before 'check 'pre-check
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(lambda _
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;; We don't want to run all the tests; the Downstream tests
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@ -1903,16 +1920,17 @@ types and sparsity.")
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(base32 "09nsf9cgk49yrvprflnhd9h5rrgs280rgj8sad3csghxdx6jqk5c"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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,@(if (target-x86-32?)
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'((modify-phases %standard-phases
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(list
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#:phases
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(if (target-x86-32?)
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#~(modify-phases %standard-phases
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(add-after 'unpack 'remove-failing-test-i686
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(lambda _
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;; Machine Precision incorrectly handled
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(substitute* "test/methods.jl"
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(("@test central_fdm\\(15, 5, adapt=2\\)\\(exp, 1.0\\)")
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"@test_broken central_fdm(15, 5, adapt=2)(exp, 1.0)"))))))
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'(%standard-phases))))
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"@test_broken central_fdm(15, 5, adapt=2)(exp, 1.0)")))))
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#~%standard-phases)))
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(inputs
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(list julia-benchmarktools))
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(propagated-inputs
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@ -1940,8 +1958,9 @@ using finite difference.")
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(base32 "0j0n40n04q9sk68wh9jq90m6c67k4ws02k41djjzkrqmpzv4rcdi"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'disable-failing-test
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(lambda* (#:key outputs #:allow-other-keys)
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(substitute* "test/fixed.jl"
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@ -2000,7 +2019,7 @@ c-style numerical formatting.")
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;; Expression: dual_isapprox(FDNUM ^ PRIMAL, exp(PRIMAL * log(FDNUM)))
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;; ERROR: LoadError: LoadError: There was an error during testing
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;; Disable as stopgap.
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`(#:tests? ,(not (target-x86-32?))))
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(list #:tests? (not (target-x86-32?))))
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(inputs ;required for tests
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(list julia-calculus
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julia-difftests))
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@ -2034,8 +2053,9 @@ differentiation (AD).")
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(base32 "02jilpjr7px6138dx2w7ixricvfgsxqdk84d9dgviranibhnjcxa"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'adjust-tests
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(lambda _
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(substitute* "test/runtests.jl"
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@ -2087,8 +2107,9 @@ update step.")
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(base32 "07sv88c472n6w4x7diy952igbcfm1s104ysnnvprld83312siw06"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'skip-failing-test
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(lambda _
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(substitute* "test/runtests.jl"
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@ -2114,8 +2135,9 @@ update step.")
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(base32 "0ndwypa397z3pwzdgc3s9plaqlqf63g3d4px5pvym5psgr6lnm3l"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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(list
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#:phases
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#~(modify-phases %standard-phases
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(add-after 'link-depot 'adjust-test-suite
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(lambda _
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(substitute* "test/runtests.jl"
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@ -2145,8 +2167,9 @@ algebra routines written in Julia (except for optimized BLAS).")
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(base32 "12x6lxzxm91y3k6s9dam46dq5hrby5sr0gy0fdfnp0xhjzdy2j0d"))))
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(build-system julia-build-system)
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(arguments
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`(#:phases
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||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'adjust-test-suite
|
||||
(lambda _
|
||||
(substitute* "test/complex.jl"
|
||||
|
@ -2182,8 +2205,9 @@ matrices the Schur form is often more useful.")
|
|||
(base32 "057j3hjpli3q5b98cqkpi4p10x2k9pyksrz62hjmv1kb5qzdvhsj"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'remove-earcut
|
||||
(lambda _
|
||||
(substitute* '("Project.toml"
|
||||
|
@ -2194,7 +2218,7 @@ matrices the Schur form is often more useful.")
|
|||
(substitute* "test/runtests.jl"
|
||||
(("@testset.*MetaT and heterogeneous data.*" all)
|
||||
(string-append all "return\n")))))
|
||||
,@(if (target-64bit?)
|
||||
#$@(if (target-64bit?)
|
||||
'()
|
||||
'((add-after 'unpack 'fix-tests-int32-i686
|
||||
(lambda _
|
||||
|
@ -2325,8 +2349,9 @@ library for parsing HTML.")
|
|||
(base32 "1jsyk3mhnwj4h19cxclx26igdqdrw51fd3k1hgav0nm67dy4cxyk"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-before 'install 'disable-network-tests
|
||||
(lambda _
|
||||
(substitute* "test/runtests.jl"
|
||||
|
@ -2457,7 +2482,7 @@ such arrays easy via traits.")
|
|||
(base32 "1n63f2zs6ail9pcl7rzgv3l0z8v1idjsaza3zgvgy7iacxsdpcj2"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Cycle with ImageMagick.jl.
|
||||
(list #:tests? #f)) ; Cycle with ImageMagick.jl.
|
||||
(propagated-inputs
|
||||
(list julia-imagecore
|
||||
julia-reexport))
|
||||
|
@ -2488,7 +2513,7 @@ dependencies.")
|
|||
(base32 "0h9m3pl3wic1jrgaqkdifz24cya5vxd3m6qdmm37pxg2y2ii2vcq"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Cycle with ImageMagick.jl.
|
||||
(list #:tests? #f)) ; Cycle with ImageMagick.jl.
|
||||
(propagated-inputs
|
||||
(list julia-abstractffts
|
||||
julia-colors
|
||||
|
@ -2530,7 +2555,7 @@ of packages designed to support image processing and computer vision.")
|
|||
(base32 "0bbpzi7bv8jdiggq1wmcn67vnf96qagvwg0fk95s125wy5980xsl"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Cycle with ReferenceTests.jl.
|
||||
(list #:tests? #f)) ; Cycle with ReferenceTests.jl.
|
||||
(propagated-inputs
|
||||
(list julia-crayons
|
||||
julia-imagebase
|
||||
|
@ -2568,8 +2593,9 @@ be downscaled to fit into the size of your active terminal session.")
|
|||
(base32 "05vzv4jsj3l9pv6yrix28hlw7wnag0mqdfjwv8shn4x71hcfxl1p"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'skip-failing-test
|
||||
(lambda _
|
||||
;; These tests try to download from the imagemagick.org
|
||||
|
@ -2646,7 +2672,7 @@ information about the detector used to acquire the image.")
|
|||
(base32 "00wq3ab8y6nyhxwc5lpz9dnslsmcr1vg3cjdkh7wb7k6a8bw98mh"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; cycle with ImageMagick.jl.
|
||||
(list #:tests? #f)) ; cycle with ImageMagick.jl.
|
||||
(propagated-inputs
|
||||
(list julia-fileio
|
||||
julia-imagebase
|
||||
|
@ -2681,7 +2707,7 @@ inline presentation of greyscale or color images.")
|
|||
(base32 "0i8gw68hljshsy9wdl5mrpbb31irhmayqyglsxi7jwm88iy9pxhm"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Cycle with ImageMagick.jl.
|
||||
(list #:tests? #f)) ; Cycle with ImageMagick.jl.
|
||||
(propagated-inputs
|
||||
(list julia-axisalgorithms
|
||||
julia-colorvectorspace
|
||||
|
@ -2718,7 +2744,8 @@ rotation, and other spatial transformations of arrays.")
|
|||
(build-system julia-build-system)
|
||||
;; Package without Project.toml
|
||||
(arguments
|
||||
'(#:julia-package-name "IndexableBitVectors"
|
||||
(list
|
||||
#:julia-package-name "IndexableBitVectors"
|
||||
#:julia-package-uuid "1cb3b9ac-1ffd-5777-9e6b-a3d42300664d"))
|
||||
(home-page "https://github.com/BioJulia/IndexableBitVectors.jl")
|
||||
(synopsis "Bit vectors operations with extremely fast speed")
|
||||
|
@ -2798,8 +2825,9 @@ indexed images, sometimes called \"colormap images\" or \"paletted images.\"")
|
|||
(base32 "1941lwvrdjnrynigzixxin3chpg1ba6xplvcwc89x0f6z658hwmm"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'remove-timezones.jl
|
||||
(lambda _
|
||||
(substitute* "test/runtests.jl"
|
||||
|
@ -2851,12 +2879,13 @@ interfaces with @file{.ini} files.")
|
|||
(base32 "1236c20k388qlh7k74mhf7hkbn0vf7ss8b1rgh1a6aj0234ayfnc"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:parallel-tests? #f
|
||||
(list
|
||||
#:parallel-tests? #f
|
||||
;; XXXX: Unexpected failures for i686, e.g.,
|
||||
;; Got exception outside of a @test
|
||||
;; OverflowError: 96908232 * 106943408 overflowed for type Int32
|
||||
;; Disable as stopgap.
|
||||
#:tests? ,(not (target-x86-32?))))
|
||||
#:tests? (not (target-x86-32?))))
|
||||
(propagated-inputs
|
||||
(list julia-axisalgorithms
|
||||
julia-offsetarrays
|
||||
|
@ -2891,9 +2920,10 @@ and exceptional performance.")
|
|||
(base32 "0gsz89cd3iygbl5qr389k9vwpg7w1nk0s90g25nsmk34y9hifxag"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
,@(if (target-x86-32?)
|
||||
'((modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
(if (target-x86-32?)
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'remove-failing-test-i686
|
||||
(lambda _
|
||||
(substitute* "test/runtests.jl"
|
||||
|
@ -2902,8 +2932,8 @@ and exceptional performance.")
|
|||
;; Expression: duration(ClosedInterval(A, B)) ≡ 60
|
||||
;; Evaluated: 60 ≡ 60
|
||||
(("@test duration\\(ClosedInterval")
|
||||
"@test_broken duration(ClosedInterval"))))))
|
||||
'(%standard-phases))))
|
||||
"@test_broken duration(ClosedInterval")))))
|
||||
#~%standard-phases)))
|
||||
(propagated-inputs
|
||||
(list julia-ellipsisnotation))
|
||||
(native-inputs
|
||||
|
@ -3183,14 +3213,15 @@ equations in string literals in the Julia language.")
|
|||
(base32 "17rhlrmgfvdw8w62pg32ikr9j4xy2ylr7mx7ar0hnpzryv929rp5"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
,@(if (target-64bit?)
|
||||
'(%standard-phases)
|
||||
'((modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
(if (target-64bit?)
|
||||
#~%standard-phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'fix-tests-int32-i686
|
||||
(lambda _
|
||||
(substitute* "test/multests.jl"
|
||||
(("Int64") "Int32")))))))))
|
||||
(("Int64") "Int32"))))))))
|
||||
(propagated-inputs
|
||||
(list julia-arraylayouts
|
||||
julia-fillarrays
|
||||
|
@ -3221,8 +3252,9 @@ implementation of matrix-free methods for iterative solvers.")
|
|||
(base32 "1qc4la07w6s1xhcyd0hvbnpr31zc1a2ssgyybc8biv5m00g0dnr0"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'skip-optim-tests
|
||||
(lambda _
|
||||
(substitute* "test/examples.jl"
|
||||
|
@ -3311,14 +3343,15 @@ that let you do deep transformations of code.")
|
|||
(base32 "0l5adird8m1cmnsxwhzi5hcr7q9bm1rf7a6018zc7kcn2yxdshy3"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
,@(if (target-64bit?)
|
||||
'(%standard-phases)
|
||||
'((modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
(if (target-64bit?)
|
||||
#~%standard-phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'fix-tests-int32-i686
|
||||
(lambda _
|
||||
(substitute* "test/runtests.jl"
|
||||
(("Int64") "Int32")))))))))
|
||||
(("Int64") "Int32"))))))))
|
||||
(propagated-inputs
|
||||
(list julia-fixedpointnumbers))
|
||||
(native-inputs
|
||||
|
@ -3350,8 +3383,9 @@ comes from the fact that @code{M == map(f, A)}.")
|
|||
(base32 "15zvcv2l4iqmjpnqjyx2kry7a85p652nbjy9pj3wq0piksqcz4jb"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'skip-failing-test
|
||||
(lambda _
|
||||
;; Tests with math functions are hard.
|
||||
|
@ -3385,8 +3419,9 @@ may include other factorizations such as the LQ factorization.")
|
|||
(base32 "0zjzf2r57l24n3k0gcqkvx3izwn5827iv9ak0lqix0aa5967wvfb"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-before 'install 'disable-network-tests
|
||||
;; Tries to connect to httpbin.org
|
||||
(lambda _
|
||||
|
@ -3470,10 +3505,11 @@ resolving them into absolute units.")
|
|||
(build-system julia-build-system)
|
||||
;; Package without Project.toml
|
||||
(arguments
|
||||
'(#:julia-package-name "Media"
|
||||
(list
|
||||
#:julia-package-name "Media"
|
||||
#:julia-package-uuid "e89f7d12-3494-54d1-8411-f7d8b9ae1f27"
|
||||
#:phases
|
||||
(modify-phases %standard-phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'create-package-toml
|
||||
(lambda* (#:key julia-package-name julia-package-uuid #:allow-other-keys)
|
||||
(with-output-to-file "Project.toml"
|
||||
|
@ -3599,7 +3635,7 @@ to be temporarily overloaded for the purpose of testing.")
|
|||
(base32 "04fgxghyb7n2ji76xkb1r1fjhzsdbgmp5wsfyyn3yjcsdqbyp8pz"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Cycle with ImageCore.jl
|
||||
(list #:tests? #f)) ; Cycle with ImageCore.jl
|
||||
(propagated-inputs
|
||||
(list julia-mappedarrays
|
||||
julia-paddedviews
|
||||
|
@ -3651,9 +3687,10 @@ Julia, with type-driven, overloadable packing/unpacking functionality.")
|
|||
(base32 "1isyj8h4nx96cr6892d154v8pw1nhr7mjyz5bd6ffr2mkzb2bq4f"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
,@(if (target-x86-32?)
|
||||
'((modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
(if (target-x86-32?)
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'remove-failing-test-i686
|
||||
(lambda _
|
||||
(substitute* "test/utilities.jl"
|
||||
|
@ -3664,8 +3701,8 @@ Julia, with type-driven, overloadable packing/unpacking functionality.")
|
|||
;; Got correct result, please change to @test
|
||||
;; so @test_broken is not enough.
|
||||
(("@test n == @allocated f\\(\\)")
|
||||
" "))))))
|
||||
'(%standard-phases))))
|
||||
" ")))))
|
||||
#~%standard-phases)))
|
||||
(propagated-inputs
|
||||
(list julia-offsetarrays))
|
||||
(home-page "https://github.com/jump-dev/MutableArithmetics.jl")
|
||||
|
@ -3742,8 +3779,9 @@ interface to interact with these types.")
|
|||
(base32 "16vn5w5274kcywh1xp0zqjk5q10xrk125aznz5av6wifwrvghk8s"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'skip-cuda-tests
|
||||
(lambda _
|
||||
(substitute* "test/runtests.jl"
|
||||
|
@ -3827,7 +3865,8 @@ optimization of functions.")
|
|||
(base32 "10h47x5ws42pkqjccimaz0yxfvz41w0yazq6inamfk4lg5g2g3d9"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:julia-package-name "OptimTestProblems"
|
||||
(list
|
||||
#:julia-package-name "OptimTestProblems"
|
||||
#:julia-package-uuid "cec144fc-5a64-5bc6-99fb-dde8f63e154c"))
|
||||
(home-page "https://github.com/JuliaNLSolvers/OptimTestProblems.jl")
|
||||
(synopsis "Collection of optimization test problems")
|
||||
|
@ -3874,7 +3913,7 @@ which they were added to the collection.")
|
|||
(propagated-inputs
|
||||
(list julia-adapt))
|
||||
;; CatIndices depends on OffsetArrays, introducing a recursive dependency
|
||||
(arguments '(#:tests? #f))
|
||||
(arguments (list #:tests? #f))
|
||||
(home-page "https://juliaarrays.github.io/OffsetArrays.jl/stable/")
|
||||
(synopsis "Fortran-like arrays with arbitrary, zero or negative indices")
|
||||
(description "@code{OffsetArrays.jl} provides Julia users with arrays that
|
||||
|
@ -4091,7 +4130,7 @@ definite.")
|
|||
(base32 "1cail43iqzbi6m9v6981rhz47zf2lcvhs5ds5gdqvc9nx5frghxq"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Tests try to mkdir /.julia
|
||||
(list #:tests? #f)) ; Tests try to mkdir /.julia
|
||||
(home-page "https://github.com/JuliaPackaging/Preferences.jl")
|
||||
(synopsis "Store configuration switches to TOML files")
|
||||
(description "The @code{Preferences} package provides an integrated way for
|
||||
|
@ -4116,8 +4155,9 @@ everything from run time algorithm choice to code generation at compile time.")
|
|||
(base32 "1d1sd87kkwbar3l608h0adzws42cwdrmp1idxx7an6mfqcsdrijw"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'skip-color-tests
|
||||
(lambda _
|
||||
(substitute* "test/text_backend.jl"
|
||||
|
@ -4150,13 +4190,14 @@ human-readable format.")
|
|||
"1fj5d1ihnhnm0pl4hbx6hcd2bpdyhm8jiaqah2axsbd069j70saf"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:imported-modules ((guix build python-build-system)
|
||||
(list
|
||||
#:imported-modules `((guix build python-build-system)
|
||||
,@%julia-build-system-modules)
|
||||
#:modules ((guix build julia-build-system)
|
||||
#:modules '((guix build julia-build-system)
|
||||
(guix build utils)
|
||||
((guix build python-build-system) #:prefix python:))
|
||||
#:phases
|
||||
(modify-phases %standard-phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'remove-conda
|
||||
(lambda _
|
||||
(substitute* "Project.toml"
|
||||
|
@ -4186,7 +4227,7 @@ human-readable format.")
|
|||
python
|
||||
(python:python-version python)
|
||||
python
|
||||
,(package-version python))))
|
||||
#$(package-version python))))
|
||||
#t)))
|
||||
(add-before 'check 'pre-check
|
||||
(lambda _
|
||||
|
@ -4278,8 +4319,9 @@ arbitrary normed vector spaces (e.g. matrix-valued integrands).")
|
|||
(base32 "051biw4b9zni7cmh2f1yzifp1v8wazlfxrdz4p44lyd1wba6379w"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'hardcode-libmath-location
|
||||
(lambda* (#:key inputs #:allow-other-keys)
|
||||
(let ((gcclib (assoc-ref inputs "gcc:lib")))
|
||||
|
@ -4427,7 +4469,7 @@ more complex visualizations.")
|
|||
(base32 "0zq4bzxvq36zr0va6iip3x97mgq5b4fwza8avszx1ryfqm3lg1f7"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Cycle with Plots.jl.
|
||||
(list #:tests? #f)) ; Cycle with Plots.jl.
|
||||
(propagated-inputs
|
||||
(list julia-nanmath
|
||||
julia-plotutils
|
||||
|
@ -4457,7 +4499,7 @@ recipes to full specifications for a plot.")
|
|||
(base32 "0vx8ndxrii53na7jsc2lki47wfpi77rn3y2r6xhiysx1qwr14msf"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Cycle with OrdinaryDiffEq.jl.
|
||||
(list #:tests? #f)) ; Cycle with OrdinaryDiffEq.jl.
|
||||
(propagated-inputs
|
||||
(list julia-arrayinterface
|
||||
julia-chainrulescore
|
||||
|
@ -4512,7 +4554,7 @@ recursive arrays like arrays of arrays.")
|
|||
(base32 "0mm6bjhs8a21pippww6b08b5frmnb9m6k8xrszrwq9zhc879zpc9"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Cycle with ImageCore.jl through ImageMagick.jl.
|
||||
(list #:tests? #f)) ; Cycle with ImageCore.jl through ImageMagick.jl.
|
||||
(propagated-inputs
|
||||
(list julia-deepdiffs
|
||||
julia-distances
|
||||
|
@ -4550,7 +4592,7 @@ package can help create and update if need be.")
|
|||
(base32 "03hyfy7c0ma45b0y756j76awi3az2ii4bz4s8cxm3xw9yy1z7b01"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:parallel-tests? #f))
|
||||
(list #:parallel-tests? #f))
|
||||
(inputs ;required for test
|
||||
(list julia-example))
|
||||
(propagated-inputs
|
||||
|
@ -4582,7 +4624,7 @@ can be avoided.")
|
|||
;; Expression: hash(tr_float, hash(1)) === hash(v_float, hash(1))
|
||||
;; MethodError: no method matching decompose(::ReverseDiff.TrackedReal{Float64, Float64, Nothing})
|
||||
;; Disable as stopgap.
|
||||
`(#:tests? ,(not (target-x86-32?))))
|
||||
(list #:tests? (not (target-x86-32?))))
|
||||
(propagated-inputs
|
||||
(list julia-diffresults
|
||||
julia-diffrules
|
||||
|
@ -4680,7 +4722,8 @@ through matrix-vector multiplication.")
|
|||
(base32 "1fb1dfdmiw2ggx60hf70954xlps0r48fcb3k3dvxynlz7ylphp96"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:julia-package-name "SafeTestsets"
|
||||
(list
|
||||
#:julia-package-name "SafeTestsets"
|
||||
#:julia-package-uuid "1bc83da4-3b8d-516f-aca4-4fe02f6d838f"))
|
||||
(native-inputs
|
||||
(list julia-staticarrays))
|
||||
|
@ -4751,7 +4794,7 @@ bytes in a chunk of memory. Think of it like a much faster version of
|
|||
"09xni9rrrax17fxjz04j1b48mk9ffww5rcbagh66jklr89mrkqhx"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Test suite tries to access the Julia package registry.
|
||||
(list #:tests? #f)) ; Test suite tries to access the Julia package registry.
|
||||
(home-page "https://github.com/JuliaPackaging/Scratch.jl")
|
||||
(synopsis "Scratch spaces for all your persistent mutable data needs")
|
||||
(description "This repository implements the scratch spaces API for
|
||||
|
@ -4872,7 +4915,7 @@ beginners.")
|
|||
(base32 "173x77a80xnh99viqa3r7rgdaksvxaw8xyfqw09gwvp4p2zrxivb"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; cycle with StatsBase.jl
|
||||
(list #:tests? #f)) ; cycle with StatsBase.jl
|
||||
(propagated-inputs
|
||||
(list julia-datastructures))
|
||||
;(native-inputs
|
||||
|
@ -4976,8 +5019,9 @@ some performance improvements).")
|
|||
(base32 "1fwiaxdpx1z9dli3jr8kyraych0jbdiny3qklynf0r13px25r6i7"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'link-depot 'skip-doctest
|
||||
(lambda _
|
||||
(substitute* "test/runtests.jl"
|
||||
|
@ -5141,8 +5185,9 @@ applied to any distance.")
|
|||
(base32 "1qwc5ll68ng80b5921ww6fvifxbsmiylakfgsbsjbzg7lzyb5i67"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
(modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'skip-failing-test
|
||||
(lambda _
|
||||
;; https://github.com/JuliaStrings/StringEncodings.jl/issues/49
|
||||
|
@ -5173,15 +5218,16 @@ texts between multiple character encodings. It is currently based on the
|
|||
(base32 "0rjcpyjwzg70n87q5r9c5i1qzigavncslxssm3rk5a3y549py56v"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
,@(if (target-64bit?)
|
||||
'(%standard-phases)
|
||||
'((modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
(if (target-64bit?)
|
||||
#~%standard-phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'fix-tests-int32-i686
|
||||
(lambda _
|
||||
(substitute* '("src/utils.jl"
|
||||
"test/runtests.jl")
|
||||
(("Int64") "Int32")))))))))
|
||||
(("Int64") "Int32"))))))))
|
||||
(propagated-inputs
|
||||
(list julia-dataapi
|
||||
julia-staticarrays
|
||||
|
@ -5379,7 +5425,7 @@ dimensions}.")
|
|||
(base32 "1lnfsmx33qspyvxw0cykwh7il8xykjpcw1080sisn95ngz2qhdmy"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; cycle with ImageMagick.jl
|
||||
(list #:tests? #f)) ; cycle with ImageMagick.jl
|
||||
(propagated-inputs
|
||||
(list julia-axisarrays
|
||||
julia-colortypes
|
||||
|
@ -5448,7 +5494,7 @@ automatic differentiation for its machine learning platform.")
|
|||
(base32 "1w3klii293caqiclfh28jggv7f53xclm9fr6xmw38brwrn1hjb48"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ; Circular dependency with various codecs.
|
||||
(list #:tests? #f)) ; Circular dependency with various codecs.
|
||||
(home-page "https://github.com/JuliaIO/TranscodingStreams.jl")
|
||||
(synopsis "Fast I/O transcoding data streams")
|
||||
(description "This package provides tools for transcoding data streams
|
||||
|
@ -5543,10 +5589,11 @@ types, modules, and dictionaries.")
|
|||
(base32 "0kp4hg3kknkm2smlcizqfd33l9x4vkahc2714gnbjp39fj285b92"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
'(#:julia-package-name "URIs" ;required to run tests
|
||||
(list
|
||||
#:julia-package-name "URIs" ;required to run tests
|
||||
#:julia-package-uuid "5c2747f8-b7ea-4ff2-ba2e-563bfd36b1d4"
|
||||
#:phases
|
||||
(modify-phases %standard-phases
|
||||
#~(modify-phases %standard-phases
|
||||
(add-before 'check 'change-dir
|
||||
;; Tests must be run from the testdir
|
||||
(lambda* (#:key source outputs #:allow-other-keys)
|
||||
|
@ -5578,7 +5625,7 @@ working with @acronym{URIs,Uniform Resource Identifiers}, as defined in RFC
|
|||
(base32 "10qwscd15dnmvx116dwvg99m7kmwgmj5ahdkq7psiq48lcc554gq"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:parallel-tests? #f))
|
||||
(list #:parallel-tests? #f))
|
||||
(propagated-inputs
|
||||
(list julia-constructionbase))
|
||||
(home-page "https://painterqubits.github.io/Unitful.jl/stable/")
|
||||
|
@ -5650,15 +5697,16 @@ allows for efficient string representation and transfer")
|
|||
(base32 "04yykivi8zrbryxlmb0p5xa6lma8iq22r5s863117dnnqj5gaffd"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:phases
|
||||
,@(if (target-x86-32?)
|
||||
'((modify-phases %standard-phases
|
||||
(list
|
||||
#:phases
|
||||
(if (target-x86-32?)
|
||||
#~(modify-phases %standard-phases
|
||||
(add-after 'unpack 'remove-failing-test-i686
|
||||
(lambda _
|
||||
(substitute* "test/woodbury.jl"
|
||||
(("@test logdet\\(W\\)")
|
||||
"@test_broken logdet(W)"))))))
|
||||
'(%standard-phases))))
|
||||
"@test_broken logdet(W)")))))
|
||||
#~%standard-phases)))
|
||||
(home-page "https://github.com/timholy/WoodburyMatrices.jl")
|
||||
(synopsis "Support for the Woodbury matrix identity for Julia")
|
||||
(description "This package provides support for the Woodbury matrix identity
|
||||
|
@ -5753,7 +5801,7 @@ Zygote, without depending on Zygote itself.")
|
|||
(base32 "1cx66sp30s34ln6p0fpqk1ggjxfxg2gp8791zz3cl85dmk4dl14b"))))
|
||||
(build-system julia-build-system)
|
||||
(arguments
|
||||
`(#:tests? #f)) ;require CUDA, not packaged yet
|
||||
(list #:tests? #f)) ;require CUDA, not packaged yet
|
||||
(propagated-inputs
|
||||
(list julia-abstractffts
|
||||
julia-chainrules
|
||||
|
|
Reference in New Issue