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gnu: r-clusterprofiler: Update to 3.16.0. 

* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.16.0.
[propagated-inputs]: Remove r-ggplot2; add r-downloader and r-dplyr.
[native-inputs]: Add r-knitr.
master
Ricardo Wurmus 2020-06-13 00:48:48 +02:00
parent 43fb14cedc
commit 63c8323ae9
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1 changed files with 6 additions and 3 deletions
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gnu/packages/bioconductor.scm
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@ -3810,22 +3810,23 @@ All the visualization methods are developed based on ggplot2 graphics.")
(define-public r-clusterprofiler (define-public r-clusterprofiler
(package (package
(name "r-clusterprofiler") (name "r-clusterprofiler")
(version "3.14.3") (version "3.16.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "clusterProfiler" version)) (uri (bioconductor-uri "clusterProfiler" version))
(sha256 (sha256
(base32 (base32
"08pd7bmqmyxncj09ilz8yb9sf1pv9ni98y8b93pz2giy7pl407hg")))) "0m7919gzrd2fddb4kcznwpshhab1ha2yppnkxg11zmh40wcdawyi"))))
(properties (properties
`((upstream-name . "clusterProfiler"))) `((upstream-name . "clusterProfiler")))
(build-system r-build-system) (build-system r-build-system)
(propagated-inputs (propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi) `(("r-annotationdbi" ,r-annotationdbi)
("r-dose" ,r-dose) ("r-dose" ,r-dose)
("r-downloader" ,r-downloader)
("r-dplyr" ,r-dplyr)
("r-enrichplot" ,r-enrichplot) ("r-enrichplot" ,r-enrichplot)
("r-ggplot2" ,r-ggplot2)
("r-go-db" ,r-go-db) ("r-go-db" ,r-go-db)
("r-gosemsim" ,r-gosemsim) ("r-gosemsim" ,r-gosemsim)
("r-magrittr" ,r-magrittr) ("r-magrittr" ,r-magrittr)
@ -3833,6 +3834,8 @@ All the visualization methods are developed based on ggplot2 graphics.")
("r-qvalue" ,r-qvalue) ("r-qvalue" ,r-qvalue)
("r-rvcheck" ,r-rvcheck) ("r-rvcheck" ,r-rvcheck)
("r-tidyr" ,r-tidyr))) ("r-tidyr" ,r-tidyr)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://guangchuangyu.github.io/software/clusterProfiler/") (home-page "https://guangchuangyu.github.io/software/clusterProfiler/")
(synopsis "Analysis and visualization of functional profiles for gene clusters") (synopsis "Analysis and visualization of functional profiles for gene clusters")
(description (description