From 649def40b83675a50597043dd86282c5d305e405 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Tue, 7 May 2024 13:06:59 +0200
Subject: [PATCH] gnu: r-xcms: Update to 4.2.0.

* gnu/packages/bioconductor.scm (r-xcms): Update to 4.2.0.
[propagated-inputs]: Remove r-multtest, r-plyr, r-rann, and r-robustbase; add r-jsonlite
and r-metabocoreutils.

Change-Id: I8ebcedc2c4b7fc073589c474de8a3ea52071d278
---
 gnu/packages/bioconductor.scm | 10 ++++------
 1 file changed, 4 insertions(+), 6 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 13a4d9715f..bb1609874d 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -17664,34 +17664,32 @@ based on @dfn{Continuous Wavelet Transform} (CWT).")
 (define-public r-xcms
   (package
     (name "r-xcms")
-    (version "4.0.2")
+    (version "4.2.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "xcms" version))
        (sha256
         (base32
-         "170s260sp880d3rb256189jvfnnmyzf9nxh8bvksng6yp561r8dc"))))
+         "1cq0jk9xyk5y5mi39zi4gvrpzx65qngfml76bygkhm2lzgy3nddb"))))
     (build-system r-build-system)
     (propagated-inputs
      (list r-biobase
            r-biocgenerics
            r-biocparallel
            r-iranges
+           r-jsonlite
            r-lattice
            r-massspecwavelet
+           r-metabocoreutils
            r-mscoreutils
            r-msexperiment
            r-msfeatures
            r-msnbase
-           r-multtest
            r-mzr
-           r-plyr
            r-progress
            r-protgenerics
-           r-rann
            r-rcolorbrewer
-           r-robustbase
            r-s4vectors
            r-spectra
            r-summarizedexperiment))