gnu: Add r-genomationdata.
* gnu/packages/bioinformatics.scm (r-genomationdata): New variable.master
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@ -4776,6 +4776,34 @@ genomic feature data as long as it has minimal information on the locations of
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genomic intervals. In addition, it can use BAM or BigWig files as input.")
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(license license:artistic2.0)))
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(define-public r-genomationdata
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(package
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(name "r-genomationdata")
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(version "1.4.0")
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(source (origin
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(method url-fetch)
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;; We cannot use bioconductor-uri here because this tarball is
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;; located under "data/annotation/" instead of "bioc/".
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(uri (string-append "https://bioconductor.org/packages/"
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"release/data/experiment/src/contrib/"
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"genomationData_" version ".tar.gz"))
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(sha256
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(base32
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"1xzq2j722d8lcn5bc3aq3yb34xwis2d0bpsf6jsq4xw1bg0bsy79"))))
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(build-system r-build-system)
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;; As this package provides little more than large data files, it doesn't
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;; make sense to build substitutes.
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(arguments `(#:substitutable? #f))
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(native-inputs
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`(("r-knitr" ,r-knitr)))
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(home-page "http://bioinformatics.mdc-berlin.de/genomation/")
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(synopsis "Experimental data for use with the genomation package")
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(description
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"This package contains experimental genetic data for use with the
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genomation package. Included are Chip Seq, Methylation and Cage data,
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downloaded from Encode.")
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(license license:gpl3+)))
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(define-public r-org-hs-eg-db
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(package
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(name "r-org-hs-eg-db")
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