gnu: r-aneufinder: Move to packages section.
* gnu/packages/bioconductor.scm (r-aneufinder): Move this definition out of the section for Bioconductor experiments packages.master
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@ -1173,48 +1173,6 @@ ranking by fold-change and visualization.")
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(description "This package contains data used by @code{AneuFinder}.")
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(description "This package contains data used by @code{AneuFinder}.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-aneufinder
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(package
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(name "r-aneufinder")
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(version "1.22.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "AneuFinder" version))
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(sha256
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(base32
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"0xn8952fkchhx7m8dam6gjy86j551xp1cs67510s1qrmfgzpkjp0"))))
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(build-system r-build-system)
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(native-inputs
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(list r-knitr))
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(propagated-inputs
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(list r-genomicranges
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r-aneufinderdata
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r-ecp
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r-foreach
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r-doparallel
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r-biocgenerics
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r-s4vectors
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r-genomeinfodb
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r-iranges
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r-rsamtools
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r-bamsignals
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r-dnacopy
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r-biostrings
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r-genomicalignments
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r-ggplot2
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r-reshape2
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r-ggdendro
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r-ggrepel
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r-reordercluster
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r-mclust
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r-cowplot))
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(home-page "https://bioconductor.org/packages/AneuFinder/")
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(synopsis "Copy number variation analysis in single-cell-sequencing data")
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(description "This package implements functions for copy number variant
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calling, plotting, export and analysis from whole-genome single cell
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sequencing data.")
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(license license:artistic2.0)))
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(define-public r-arrmdata
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(define-public r-arrmdata
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(package
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(package
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(name "r-arrmdata")
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(name "r-arrmdata")
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@ -1587,6 +1545,48 @@ TCGAbiolinksGUI package.")
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;;; Packages
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;;; Packages
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(define-public r-aneufinder
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(package
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(name "r-aneufinder")
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(version "1.22.0")
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(source (origin
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(method url-fetch)
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(uri (bioconductor-uri "AneuFinder" version))
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(sha256
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(base32
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"0xn8952fkchhx7m8dam6gjy86j551xp1cs67510s1qrmfgzpkjp0"))))
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(build-system r-build-system)
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(native-inputs
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(list r-knitr))
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(propagated-inputs
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(list r-genomicranges
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r-aneufinderdata
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r-ecp
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r-foreach
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r-doparallel
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r-biocgenerics
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r-s4vectors
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r-genomeinfodb
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r-iranges
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r-rsamtools
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r-bamsignals
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r-dnacopy
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r-biostrings
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r-genomicalignments
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r-ggplot2
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r-reshape2
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r-ggdendro
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r-ggrepel
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r-reordercluster
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r-mclust
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r-cowplot))
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(home-page "https://bioconductor.org/packages/AneuFinder/")
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(synopsis "Copy number variation analysis in single-cell-sequencing data")
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(description "This package implements functions for copy number variant
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calling, plotting, export and analysis from whole-genome single cell
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sequencing data.")
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(license license:artistic2.0)))
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(define-public r-biocversion
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(define-public r-biocversion
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(package
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(package
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(name "r-biocversion")
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(name "r-biocversion")
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