From 679560ffca1217ffd7d024266f0ae571b1fc940d Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Mon, 1 Jan 2024 19:21:59 +0100 Subject: [PATCH] gnu: Add r-databaselinke-r. * gnu/packages/bioinformatics.scm (r-databaselinke-r): New variable. Change-Id: I0cfcb5b6810b7afebbb9ccb02aafcce05507536c --- gnu/packages/bioinformatics.scm | 28 ++++++++++++++++++++++++++++ 1 file changed, 28 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index de37d19264..2cfbd4eda6 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -17996,6 +17996,34 @@ The tool enables the de novo search for new structural elements and facilitates comparative analysis of known RNA families.") (license license:bsd-3))) +(define-public r-databaselinke-r + (let ((commit "cf3d6cc3d36f2e1c9a557390232e9a8ed5abb7fd") + (revision "1")) + (package + (name "r-databaselinke-r") + (version (git-version "1.7.0" revision commit)) + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/vertesy/DatabaseLinke.R") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0hk76sb3w1v8a7c1knpc572ypsbgqlrv0p49c9y55a0dr12n16s1")))) + (properties `((upstream-name . "DatabaseLinke.R"))) + (build-system r-build-system) + (propagated-inputs (list r-readwriter)) + (home-page "https://github.com/vertesy/DatabaseLinke.R") + (synopsis + "Parse links to databases from your list of gene symbols") + (description + "This package provides a set of functions to parse and open (search +query) links to genomics related and other websites for R. Useful when you +want to explore e.g.: the function of a set of differentially expressed +genes.") + (license license:gpl3)))) + (define-public r-seurat-utils (let ((commit "0b6f5b548a49148cfbeaa654e8a618c0a020afa5") (revision "1"))