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gnu: Add r-bhc.

* gnu/packages/bioconductor.scm (r-bhc): New variable.
master
Ricardo Wurmus 2019-12-17 19:47:00 +01:00
parent 75eb1149f3
commit 6bd50acf41
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@ -6600,3 +6600,29 @@ gene expression.")
"This package provides tools for Bayesian integrated analysis of
Affymetrix GeneChips.")
(license license:gpl2)))
(define-public r-bhc
(package
(name "r-bhc")
(version "1.38.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "BHC" version))
(sha256
(base32
"1bxx3jak8mgvay3j1xd59bb9j86pzl6hh5abxww9x1b7rswmy1jh"))))
(properties `((upstream-name . "BHC")))
(build-system r-build-system)
(home-page "https://bioconductor.org/packages/BHC/")
(synopsis "Bayesian hierarchical clustering")
(description
"The method implemented in this package performs bottom-up hierarchical
clustering, using a Dirichlet Process (infinite mixture) to model uncertainty
in the data and Bayesian model selection to decide at each step which clusters
to merge. This avoids several limitations of traditional methods, for example
how many clusters there should be and how to choose a principled distance
metric. This implementation accepts multinomial (i.e. discrete, with 2+
categories) or time-series data. This version also includes a randomised
algorithm which is more efficient for larger data sets.")
(license license:gpl3)))